Salvelinus namaycush (lake trout): 120031195
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Entry
120031195 CDS
T07522
Name
(RefSeq) valine--tRNA ligase-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120031195
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snh01007
]
120031195
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120031195
Enzymes [BR:
snh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
120031195
Amino acid related enzymes [BR:
snh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
120031195
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120031195
Prokaryotic type
120031195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
GST_C_2
Arc1p_N_like
GST_C_3
Val_tRNA-synt_C
tRNA-synt_1e
Jag_N
Motif
Other DBs
NCBI-GeneID:
120031195
NCBI-ProteinID:
XP_038832763
UniProt:
A0A8U0PXP6
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All DBs
Position
Sna37:complement(18438289..18454837)
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AA seq
1276 aa
AA seq
DB search
MASLYVSPHPDDFRSLMALVAAEFCPSRPCTLIEDPPASLALCSRPGLVLDSGGGEVLSG
ASAVAWYLASQGKRTGSNAKQESQVWQWLSFADNELTPVSCAVVFPLLGVMGVDKKLQQS
SHAEMMRVLNVLDKNLEPRTFLVGDSLTLADIAVATAALLPFKYALEPSNRKALTNVTRW
FLTCVNQPQFVKVLGQISLCEKMVPVTSKPSVAPVPAANANPTADANAASGKPKTEAQLK
KEAKNREKLEKFQKKKEMEEKKKQEKKLAPPTEKKAKPEKKDLGVISYDVPTPPGEKKDV
LSPLPDSYSPQYVEAAWYSWWEKQGYFKPEYGRKSISEPNPRGVFMMCIPPPNVTGSLHL
GHALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGMSRHDLGRDQF
IQEVWKWKNLKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFICLHEDGVIYRSK
RLVNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKDKVEFGVLVSFSYKIEGSDEEVIVA
TTRIETMLGDSAVAVHPADPRYQHLKGKMVLHPFCDRKMPIVFDEFVDVNFGTGAVKITP
AHDHNDYEVGNRHNLAFINILDENGLLINVPAPFLGMKRFEARKAVLQALKDRGQFKETK
DNPMVVPVCSRSKDIVEPLLKPQWYVDCADMGKQAADSVREGRLKIIPDHHHKTWFNWLD
NIRDWCISRQLWWGHRIPAYFVTVNDPSVKPGEDMDGHYWVSGRTEEEARDKAAKRFNVS
TDKITLRQDEDVLDTWFSSGIFPFSIFGWPNENQDLSVFYPGSLLETGHDILFFWVARMV
MMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVVDPLDVITGISLEGLYAQLQDSNL
DPVEVEKAKQGQKSDYPTGIPECGTDALRFALCAYTSQGRDINMDVNRILGYRHFCNKLW
NAVKFAMRTLGDNFVPSEKAQLCGEESVSDRWILSRLCTAVGLCNAGFQAYDFPAITTAI
YNFWLYELCDIYLESVKPVFSRVEEDIGSQSQAVVCRQTLFTCLETGLRLLAPIMPFVGE
ELYQRLPRRRSQDECSSIHVTPYPETEEFCWHSEDVDRQMEFVMTVVRTIRSLRADYNLT
KTRADCYLQCIDSETMSLVEQYSLQIQTLSLSQTIQPVPATGAVPEGCAVAIASDRCTVH
LMLKGLIDLEKEVAKLTVKKGELEKQMDKLREKMDKSDYKEKVPVKVQELDAEKLRQSQT
ELEKATEAIDNFKRMV
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctctacgtctccccccatcctgatgacttcaggagcctcatggccctggtc
gctgcagagttctgcccctctcggccctgcacactcatagaggaccctcctgcttccctg
gccctgtgctctcgccccggcttggtgctggactctgggggaggtgaggtgctctctggg
gccagtgctgttgcatggtacctagcctctcaggggaagaggaccggatcgaatgctaag
caggagagccaggtgtggcagtggctcagctttgcagacaatgagctgactcctgtgtcc
tgtgctgtggtgttcccactgctgggggtgatgggagtggataagaagcttcagcagagt
tctcatgctgagatgatgcgcgtgctaaacgttctagataagaacctggagcctagaaca
ttcctggtgggagacagcctcactctggccgacatcgctgtggcaaccgcagcactcctg
cccttcaaatacgccttggagccatccaacaggaaagccctgacgaacgtgaccaggtgg
tttctgacctgtgtcaaccagcctcagtttgtcaaggtcctgggacagatctctctgtgt
gagaagatggtgcccgtcacatccaaacccagtgttgctcctgttcctgctgctaacgct
aatccaactgctgatgccaacgctgccagtggcaaaccaaagacagaagctcagctgaag
aaggaggctaaaaacagagagaagctggagaagttccaaaagaagaaggagatggaggag
aagaaaaagcaagaaaagaaactggcacccccgacagagaaaaaggccaaaccagagaag
aaggacctgggagtgatctcatacgacgtccctacccctcctggagagaaaaaagacgtc
ctgagccccctgccagactcgtacagtcctcagtacgtggaggcagcctggtactcctgg
tgggagaagcagggttacttcaagcctgaatacgggcggaagagtatcagtgagccgaat
ccccgtggagtgttcatgatgtgtatccctccgcccaatgtgacgggatctcttcactta
ggccatgccctaaccaatgccatccaggactgtctgaccagatggcaccgtatgcgtggc
gagacgaccctgtggaacccaggctgtgaccacgcgggtatcgccacccaggtggtggtg
gagaaaaaactgatgagggagaggggcatgagccgtcacgacctggggagagaccagttc
atccaggaggtctggaagtggaagaacctgaagggagaccgtatttaccaccagctgaag
aagctgggttcctctctggactgggacagagcctgcttcaccatggaccctaaactgtcc
tatgcagtccaggaggcgttcatttgtctgcatgaggacggcgtgatctacaggagcaag
aggctggtcaactggtcctgcaccctcaactctgccatctcggatatagaggtggataag
aaggagctgactggcaggactctgctgcccgtgcctggctacaaggacaaagtggagttt
ggagtactggtctccttctcctacaagatagagggatcagatgaggaggtgattgtggcg
accactcgtatagagaccatgctgggagattctgctgtggccgtccaccctgccgacccc
agataccagcaccttaaagggaagatggtgcttcatcccttctgtgacaggaagatgccc
atcgtgtttgatgagtttgtggacgtcaactttggaacgggtgctgtgaagataacccca
gcccatgaccataatgattatgaggttggaaacagacacaacctggccttcatcaacatc
ctggatgagaacggcctgctcatcaatgtgccggctccattcttgggtatgaaacgtttc
gaagcgaggaaggctgtgctgcaggctctgaaggacagaggccagttcaaggagaccaaa
gacaaccccatggtggtgcctgtctgcagtcgttctaaggacatagtggagcccctgctg
aagcctcagtggtatgtggactgtgctgacatgggcaagcaggcagctgactcggtccgg
gagggaagactcaaaatcatcccagaccaccaccataagacctggttcaactggttggac
aacatcagggactggtgtatctctcgtcagctgtggtggggtcacaggatcccagcctac
tttgtcaccgtgaacgacccttcagtcaaaccaggagaggacatggatggtcattactgg
gtgagtgggaggacagaggaggaggccagagataaagctgccaagcgcttcaacgtctcc
actgacaagatcaccctcagacaggatgaggatgtcctggatacatggttctcctctggt
attttccccttctccatcttcggctggcccaacgagaaccaggacctgagtgtgttctat
ccaggcagcctgctggagacaggtcatgacatcctgttcttctgggtggcccgcatggtg
atgatgggcctcaaactcaccggcaagctgcccttcaaagaggtgtacctccatgcggtg
gtgagggacgcccacgggaggaagatgagcaaatctctgggtaacgtcgtcgaccctctg
gacgtcatcacaggcatctctctggagggtctgtatgcccagctgcaggacagtaatctg
gacccagtagaggtagagaaggccaagcagggacagaagtctgactaccccactggtatc
ccagagtgtggcacagatgccctccgcttcgccctgtgtgcctacaccagccaaggcagg
gacattaacatggatgtgaatcgtatccttggttaccgtcacttctgtaacaaactgtgg
aatgctgtgaagtttgccatgagaacgctgggagacaactttgttccttcagagaaagcc
cagctgtgtggggaggagagtgtgtcagaccggtggattctgtcccgtctgtgtactgct
gtgggtctgtgtaatgcagggttccaggcctacgacttcccagctatcaccacagccatc
tacaacttctggctctacgagctctgtgacatctatctggagagtgtgaagccagtgttc
tccagggtggaggaggacattgggtctcagagccaggctgtagtctgcagacagaccctg
ttcacctgcctggagactggcctgcgtctcctagctcccataatgcccttcgtgggcgag
gagctctaccagaggttgccacggcgacgatcccaggatgaatgttctagtatccatgtt
acgccctaccctgagactgaggagttctgctggcacagtgaggacgtggaccgtcagatg
gagtttgtgatgaccgtggtccggaccatccgttcactcagggccgactacaacctgacc
aagacacgcgccgattgctaccttcagtgtatagacagtgagacaatgtctctggtggag
cagtacagtctgcagatccagaccctgtctctttcccagaccatccagcccgtcccagcc
accggggccgtcccagagggctgtgctgtggccattgcctccgatagatgcaccgtccac
ctcatgctcaagggtctgatagacttggagaaggaggtggccaagctgactgtgaagaag
ggagagctggagaaacagatggataaactgagagaaaagatggataagagtgactacaag
gagaaggtgcctgttaaagtacaggagctggacgctgagaagctgcgtcagagccagacg
gagctggagaaagcaacggaagccatagacaacttcaagagaatggtgtaa
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