Salvelinus namaycush (lake trout): 120031199
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Entry
120031199 CDS
T07522
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a isoform X1
KO
K06781
cell adhesion molecule 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120031199 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120031199 (cadm1a)
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Nectin family
120031199 (cadm1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Ig_5
C1-set
C2-set_3
Adhes-Ig_like
Syndecan
DUF3439
Motif
Other DBs
NCBI-GeneID:
120031199
NCBI-ProteinID:
XP_038832770
UniProt:
A0A8U0PX53
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Position
Sna3:37853100..38302555
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AA seq
424 aa
AA seq
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MAITGNGSLATLLFLFMIPAALHKVQSQNLVTDNVAVVEGDVAVISCRVKNNDDSVIQLL
NPNRQTIYFRDVRPLKDARFQLVNFSDNELRVSLSNVTLSDEGRYVCQLYTDPPQEAYAD
ITVLIPPGNPIIESREGQVIEGNETEMTCTAMGSKPAATIRWMKGDKELQGKSKVEETYD
TMFTVTSQLTFTVTKEDDGVPVVCIVDHPAVKDVQAQTYLVVHYKPEVKIVVEFPDGLPR
EGQNMELSCQAKGKPHPQQINWVKVDDDLPSHALITGPDLYIENLNKTYNGTYRCFAANS
VGESYDDYILYVYDAPTTTPIPTTATTTTPTTTTISLPEATADSRAGEGAPRAVDHAVIG
GVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNSDEKK
EYYI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcacaggcaacggatctctcgctactcttctctttttgttcatgattccagca
gctcttcataaagtccagagtcagaacctggtgacggacaatgtggcggtggtggaggga
gacgtggccgtcatcagctgccgggtgaagaacaacgacgactcggtcatccagctcctc
aaccccaacagacagacaatctatttcagagacgtccgacccctgaaagatgctcgcttc
cagctggtgaacttctcggacaatgagctgcgggtgtctctgtccaacgtgaccctgtct
gacgaggggagatacgtgtgccagctgtacacagaccctccacaggaggcctatgctgac
atcactgtgctgatccctccaggcaacccaatcatcgagtcccgggaggggcaggtaatc
gagggcaatgagacagagatgacctgcaccgccatgggcagcaagcccgccgccaccatc
agatggatgaagggagacaaagagctccaaggtaagtcgaaggtagaggagacgtacgac
accatgttcaccgtgaccagccagctgacgttcaccgtcaccaaggaggacgacggtgtg
cccgtggtgtgcatcgtggaccacccagccgtcaaagatgtccaggcccagacgtacctt
gtggtacattataaaccagaggtgaagattgtagtggagtttcctgacgggctgccaagg
gaaggacagaacatggagctgtcatgccaggccaaaggcaaaccccatccccagcagatc
aactgggtgaaggtggacgacgatctgccctcacacgccctcatcaccggcccggacctg
tacatcgagaacctcaacaagacctacaacggcacctaccgctgcttcgctgccaactca
gtgggcgagtcgtatgacgactacatcctctatgtctatgatgccccaaccactacccct
atacccactacagctactaccaccactcccaccaccacaaccatctccctccctgaagcc
actgcagattccagagctggagagggagcaccgagagcggtcgaccatgcagtcattgga
ggagtggtggctgtggttgtctttgccatgctctgtctactcatcattttgggacggtac
tttgcaagacacaaaggtacctacttcacgcatgaagctaaaggagccgacgatgcagca
gatgcagacacggccattatcaacgcagaggggggccacaacaactcggacgagaagaag
gagtactacatatag
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