Salvelinus namaycush (lake trout): 120031225
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Entry
120031225 CDS
T07522
Name
(RefSeq) GA-binding protein subunit beta-1-like isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120031225
03029 Mitochondrial biogenesis [BR:
snh03029
]
120031225
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
120031225
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
120031225
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_5
Ank_4
Ank_KRIT1
ANK_LRRK2
GrpE
TFIIA
FliJ
Motif
Other DBs
NCBI-GeneID:
120031225
NCBI-ProteinID:
XP_038832806
UniProt:
A0A8U0PYD6
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Position
Sna37:complement(13533954..13539705)
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AA seq
470 aa
AA seq
DB search
MSLVDLGKRLLEAARAGLDDDVRTLMVNGAPFTTDWLGTSPLHLAAQYGHHSTAEVLLRA
GVSRDARTKVDRTPLHMAATEGHSNIVELLVSQSGADINAKDMLKMTALHWAAQHGHREV
AELLLKYGADVHSLSKFDKTPFDIAMDTSNTELMILLQDGMQNQVNMNPEPQFIISSAGV
VNLSDLVNTTAKSGESVSTTSVLATLAALAEASGPMGKNAGKSEDAIAADSVDSAIQHVV
GDGGQRVITIVTDQHGNLQPAGLGQQFFVTMQGQQMVAVPAGQITEEVVEQEPYPSPARK
RRIEPAAILTRPKDKKAKSGDSSREQLQKQLQEANRKAQEYRTQLLQKEQEAEQYRLRLE
EAIEQQQSNNTSSIAGSTSTGVQEVDEEVVQMEKQRETEEIVVEEDKVEGEEDVPFPEDT
ILVKVEEELDSGEGEQITVDDTEETEKASTKVTTTPKRGRGRGRGRGRRR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggtggacctggggaagcggctgctggaggctgcacgggcagggctggatgat
gatgtcaggaccctcatggtcaatggagctcccttcaccactgattggctggggacttcc
ccgctccatctagctgctcagtacggacaccactccacggctgaggtgcttctccgagca
ggcgttagcagggatgcccggaccaaagtggacaggaccccactccacatggcggccacg
gagggccactccaatatagtggagctgctagtcagtcagagcggagcggacatcaacgct
aaggacatgctgaagatgacagccctgcattgggcggcccagcacggtcacagagaggtg
gcagagctgctgctcaaatatggagcagacgtccactccctcagcaagtttgacaagacg
ccctttgacatcgccatggacaccagcaacactgagctcatgatactgttacaggatggc
atgcagaaccaagtgaacatgaacccagagccccagttcatcatctcctctgctggggtc
gtgaacctctctgacctcgtcaacaccaccgccaagtcaggagaatctgtctctaccacc
tcagtcctggcaacactggcagccctggcagaagcctcaggtcccatgggtaaaaatgca
ggcaaatctgaggatgcaatcgctgcagattctgtggactcggccattcagcatgtagtg
ggcgatggaggtcagagggtcatcaccatagtgacggaccaacacggaaacctgcagcca
gcgggacttgggcagcagttctttgtcactatgcaggggcagcaaatggtggcagtcccg
gctggtcagatcacagaggaggtggtggaacaggagccttacccctctcctgcacgcaag
aggagaatagagcctgcagccatcctaaccagacccaaagacaagaaagcgaagtcaggg
gacagcagtcgggagcagctccagaagcagctgcaggaggccaatcggaaggcccaggag
taccgcacacagctcctacagaaggagcaggaggctgagcagtaccgcctccgactagag
gaggccatagagcaacaacagagcaacaataccagtagcattgctggttctaccagcaca
ggtgtccaggaggtagacgaggaggtggtccaaatggaaaaacaacgcgagacagaggag
atagttgtagaggaggacaaagtggaaggggaggaggacgtcccatttccggaagacacc
attctggttaaagtggaggaggagctggattcaggggagggagaacagataacagtggat
gataccgaggaaacggagaaggcttcaactaaggtcacaacgacccccaaacgggggaga
gggaggggacgaggacgtggaaggaggcggtag
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