Salvelinus namaycush (lake trout): 120031237
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Entry
120031237 CDS
T07522
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1-like
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04020
Calcium signaling pathway
snh04148
Efferocytosis
snh04218
Cellular senescence
snh04310
Wnt signaling pathway
snh04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120031237
04310 Wnt signaling pathway
120031237
04020 Calcium signaling pathway
120031237
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120031237
09143 Cell growth and death
04218 Cellular senescence
120031237
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
120031237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120031237
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
120031237
SSDB
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Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
120031237
NCBI-ProteinID:
XP_038832829
UniProt:
A0A8U0TYX6
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Position
37:complement(5571610..5636863)
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AA seq
882 aa
AA seq
DB search
MGNPCLATQYHTMQSSPIISVSSCHQTGYGLHDHNNHNPVQGYYMSHGLRPNGAPALESP
RIEITAYHQYPEEEVEESSTMDHIVHHKRGVNSIVTLTLPNADGYRDPSCLSPASSVSSR
SCNSDASSYESGFYNYDNSPQNSPWQSPCVSPKGSSSLLSCPHAPLGPPSTSPRHSPSTS
PQIGAQAEEGWAGQGPCGSSRPNSPACSGGGGGVGVGKRKYSFNSTTYRQPTYSPNQSST
PSPRGSPRVSVTDDSWLANTNQYTNSAIVAAINALTTDGVVDMGEGIPVKARKTNLDHSP
TMSLKTEPGGEEMGPGSELLQGDYISRLPFKKESYCGGFLDVPQQPYSWSKPKPYLSSLP
ALDWQLPSCSGPYSLQIEMQPKSHHRAHYETEGSRGAVKASSGGHPVVQLYGYMESEPLT
LQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEALQSNTKVLEIPLLPENNMRAIIDC
AGILKLRNSDIELRKGETDIGRKNTRVRMVFRVHINQPNGRTISLQASSNPIECSQRSAQ
ELPLIEKQSLDSFTATGGKKILLNGHNFLPDSKVVFVEKAQDGHHLWETEAKVDKDSFKS
TALVVEIPPYRNQRISSPVQVNFYVCNGKRKRSQYQRFTYLSPNVPIIKTEPNDEYEPLG
AHSKPYYGQPRLTPIIPVGDADTCLVGVYPPCPPCHGSIGSMPASSPSSSPTLHDLSPVS
YPKCLSTSPTHAHNGLLASAIQETPGQCPAPLVCPSSPDQAPLGMLHSQGSSPHHLGSPG
PHGYHPLYPNSSPSTSPESLPSTPGVAAESPFAQAPPYSPTQGQSQTQARISPPNLLPVD
ASPPSLAVTVKREPQDLDQMYLDDVNEIIRNDLSSISVHLST
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacccctgtctggccacccagtaccacacgatgcagtccagccccattatctcc
gtgtcgtcctgccaccagacaggctatggtctccatgatcacaacaaccacaacccagtc
cagggctactacatgtcccacggcctgaggcctaacggggccccggccctggagagtcct
cgcatcgagatcacagcctaccaccagtaccctgaggaggaggtggaggagagcagcacc
atggaccacatcgtccaccacaagcggggggtcaactccatcgtgaccctgacgctgcca
aatgccgatggctaccgcgaccccagttgcctcagcccggccagcagcgtgtcatcacgt
agctgcaactcggatgcgtcgtcctacgagtccggcttttacaactatgacaactcaccc
cagaactcgccatggcagtctccttgcgtctctccgaaaggctcatcctctctcctctcc
tgcccacacgctcctctcggccccccctcgacctccccccgccactcgccttctacctcc
ccccagattggggcccaagccgaggagggctgggcggggcaggggccctgtggaagctcc
aggcccaactccccagcttgcagtggaggaggtggcggcgttggcgtggggaagaggaaa
tacagcttcaacagcaccacctacagacagccaacctactcgcccaaccagtcgtccacg
ccttccccgcgcggctcgcccagggtcagcgtcacagacgacagctggctggccaacacc
aaccagtacaccaactctgccatcgtggcggccatcaacgccctcaccaccgacggagtg
gtcgacatgggcgagggcatccccgtcaaggcccgcaaaaccaacctagaccacagcccc
acgatgagcctgaagacggagccgggaggagaggagatgggccctgggagcgagctcctc
cagggggactacatctcccgcctgcctttcaagaaggagagctactgtggcggcttccta
gacgtgccccagcaaccctactcctggtccaagccaaagccctacctcagctccctgcct
gccctggattggcagctgccgtcttgctctggcccgtacagtctgcagatcgagatgcaa
cccaagtcccaccaccgtgcccactacgagacagagggcagccgcggggcagtcaaagct
tcgtccggaggtcatccggtcgtacagctctacggttacatggagagcgagccccttacc
ctgcagctgttcatcgggaccgcagacgaccgcctcctgcgaccgcacgccttctaccag
gtccaccgcatcacgggcaagactgtctctaccgccagccacgaggccctgcagtccaac
accaaggtgctggagatccctctgctgcccgagaacaacatgcgagccatcattgactgt
gcagggattctgaagctgcggaactccgacatcgagctgcgtaagggcgagacggacatc
gggcgcaaaaacacgcgcgtgaggatggtgttccgtgtgcacatcaaccagcccaatggc
aggaccatctccctacaggcctcgtccaaccccatcgagtgctcccagcgctcggcacag
gagctgcccctgatagagaagcagagcctggacagcttcaccgccacggggggaaagaag
atcctcctgaacggacacaactttctcccagactccaaggtggtgttcgtggagaaggcc
caagatggacaccacctttgggagacagaagccaaagttgacaaggactccttcaagtct
acggcgctggtagtggagatccctccctacaggaaccagagaatatccagcccagtgcag
gtcaacttctacgtctgcaatggcaagagaaagaggagccaataccagcgcttcacctac
ctctccccaaacgtcccgataataaagacagaaccgaatgatgaatatgagcctctgggg
gctcattccaagccttactatggccaacccaggctcactcctatcatacctgtgggggac
gctgacacctgcctggtcggggtttatcctccctgcccgccttgccatggcagcattggc
agcatgcccgcctcctccccaagttccagcccaacactccacgacctgtcccccgtgtct
taccccaagtgcctctccaccagccctacgcacgcccacaacggtctcttggcgtccgcc
atccaggagacgccagggcagtgcccagcgccgctggtctgcccttcctcacccgaccaa
gctccactgggcatgctccactcccagggcagcagcccgcatcaccttggtagccccggt
ccccatggctaccacccgctctaccccaacagcagcccctccacctcccctgagtccctc
ccctccactccaggggtggcagcagagagcccgttcgcccaggcaccaccttacagcccc
acccagggacagagccagacccaggccaggatcagccctcccaacctgctgccggtagat
gccagccccccctccctagccgtcaccgtcaagcgggaaccccaggatctggaccagatg
tacctggacgatgtcaatgagatcatccgaaacgacctgtccagcatctcagtgcatctc
agcacataa
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