Salvelinus namaycush (lake trout): 120031290
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Entry
120031290 CDS
T07522
Name
(RefSeq) roundabout homolog 1-like
KO
K06784
roundabout, axon guidance receptor 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120031290
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
ROBO family
120031290
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GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_6
Pur_ac_phosph_N
Big_4
Motif
Other DBs
NCBI-GeneID:
120031290
NCBI-ProteinID:
XP_038832905
UniProt:
A0A8U0PXF2
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Position
Sna3:complement(39590970..39618414)
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AA seq
1128 aa
AA seq
DB search
MTEQVFIRMLVVFAALGNLAGSRLRAEVVEVTPLIVHHPSDVVVKVGSPATLSCRAEGTP
EPSIEWLHNGQPLEMDKLDSQSRPIVLSEGSLFFLRVVPGRRSQTQGVYACVAKNSAGKA
TSRNASLYIAALREDFRVQPIDVEVAVEEVAVMNCSPPVGHPEPNVTWKKDGVPINNTDP
HYTALNGKLIIAPAQKNDSGVYICVASNTVGVRESRAARLSVLAKPVLVLKPQDMSVGMG
ESAQFYCEAKGDPMPAVEWSREQGPLPNGRYLVNPDQSLQIHYVTSLDSGRYTCTAVNDV
GVVTASAQLVVEEAASTRQRDLHRELSALRVALENVTVLTPNSNMSQVQWKLQSFPTQPH
YLDGFEVLYRSLLPASSDWAAKRVVLPNFQTLVGPLKRGYKYEFKVRPYGSSLYGRESNT
RHLGVPETVPSAPPQAISITMTPDHNDTVNVTWKPPPHESHNGIIKGYQVWCVQSEEQQY
LNWTVDGGTYSLEITPLYPGKQYWVRVATVNGAGVGVQSDPLRVVIDSQRSGAPQLDSPS
RDLTQVLAVLRGPVFIGSVGALLWCILVITAVCLYRRHTRPGDHLGQGHIKAKGLYRLAS
EDLIIKHRMAAPDSPWISGVWRPTLSDEKYQGLWAQSQENPGFRRTTLPITAKKDPSSLD
VAVPIVPDSCGVYGTFYVDLTGNGLKTFNSPARCPKRPHCHTTTSSQHGAATVRISQPAT
VVQDGQALPWKQALPSQPKMGVLKESWENNYKQDLHAVNSAPLLSSRSQALAMRGMPYKQ
RLSHLPPGGRSECFKPLASPRFLHYSASLHLEDMLPPPLPMGDTTDTHSLTSEEGSSRST
KLTVDAGSLQSVCAASGHHGPPTNTNTNTTGCPSYSRLSTASYCMSLDEEQDATMTSQEV
AQYLELSPRAEKHSTTLENPPASSLSRTFSPTPTLGYIYGPLPSDQLEDGMTDEQEPMGP
RRARFQSTPSSLCSEWEGSLWNGWGSVSEGNMANSTRNSFISSSDGSFMNDANFARVLAT
VAAESMSEASFSDFSPPASPLSALFPPARGEEEECFGELDPMPVWDWSTAWVEEMEAQYR
AQYPSQAAATPACNTWGRCRDDLHYDNRRATGGSRGEGRGGVRTTPHR
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacaggtgtttataagaatgttggtagttttcgcagctcttggaaaccttgca
ggttccaggctgagggcggaggtagtggaggtaaccccgctgatcgtccaccacccctca
gacgtggtggtcaaggtaggcagccctgccaccctctcctgccgtgccgaaggcacaccc
gagccctccatcgagtggctccacaatggccagcccctggagatggacaagctggacagc
caatcgcggcccatcgttctgtcagagggcagcctgttcttcctcagggtggtccctggg
aggcggagtcagacacagggtgtgtatgcgtgcgtggcaaagaacagcgcaggcaaggcc
accagccgcaatgcctctctctatatcgcagctctccgtgaagacttccgggtgcagccc
attgatgtggaggtggctgtggaggaggtggcggtgatgaactgcagcccgccggtggga
caccccgagcccaacgtcacctggaagaaagacggggtccccatcaacaacactgacccg
cattacactgcgctgaatgggaagttgatcattgccccagcccagaagaatgactctggc
gtgtacatttgtgtggcttccaacactgtgggagtaagagagagcagggccgcccgcctt
tctgtcctagccaagccagtgttggtgctaaagcctcaggatatgtcggtggggatgggg
gagtctgcccagttctactgcgaggctaaaggagatcccatgcctgctgtggagtggagc
cgcgagcagggccctctgcccaatggcaggtatctagtgaatcctgaccagagcctccaa
atccactatgtgacgtcactggattctgggaggtacacctgcacagctgtcaacgacgtg
ggggtggtcaccgccagcgcacagctagtggtggaggaagccgcaagtaccagacagagg
gaccttcacagagagttgtcggccctgcgcgtggctctggagaatgtgacggtgctgact
ccaaactccaacatgtcccaagtgcagtggaagctccagtctttcccaacccagccacac
tacctggatggtttcgaggtcctctatcgctctctcctgcccgccagttcggactgggcg
gctaagagggttgtactaccaaacttccaaacactggtcggcccgctcaagaggggctac
aagtatgagttcaaagtgcgtccctacggcagcagcctgtacggccgggagagcaacacc
aggcacctaggtgtacctgagacagtgcctagtgccccacctcaggccatctccataacg
atgacccctgaccataatgacacggtcaatgtgacctggaagcctcccccccatgaatct
cacaacggcatcatcaagggataccaggtgtggtgtgtgcagtcggaagagcagcagtac
ctgaactggacagtggacggtgggacctacagtctggaaataacccctctctacccaggg
aagcagtactgggtccgggtggcaacggtcaacggagctggtgttggggtacagagtgac
cccctgagagtggtcatagactcccagaggtccggggcaccccagttggacagccccagt
agggacctcactcaggtcctggccgtgctgaggggcccagtgttcattgggagtgttggc
gccctcctgtggtgcatcctggtgataacggccgtctgcctgtaccgccgccacacccgg
cctggcgaccacctgggacaaggccacatcaaggctaaaggtttgtacaggttggccagt
gaggacctcatcataaaacacagaatggcggccccagactctccgtggatctcgggtgtg
tggagaccgaccctgagtgacgagaagtaccagggactgtgggctcagagccaggagaac
cccggcttcagaaggactacgttgcccatcacagccaagaaggaccccagctctctggac
gtagctgtccccattgtgcccgacagctgtggtgtctacgggacgttctacgtggacctg
acgggtaatggcctcaagaccttcaacagccctgcccgatgccccaagcggccccactgc
cacaccaccacctcctcgcagcacggcgcagcgacggtgcgcatctcccagcctgccaca
gttgtccaggatggccaggcattgccatggaaacaggccttgccctcgcagcccaagatg
ggcgtgctcaaggagtcgtgggaaaataattacaagcaagatctccatgcggtgaacagc
gcccccttgctgtcgtcgaggagccaggcgctggctatgaggggaatgccttacaaacag
aggctcagccacctcccaccaggtgggcgctcggagtgcttcaagcccctggcgtcgccc
cgcttcctgcactactctgcctcactgcacctggaggacatgctgccacccccgctgccc
atgggcgacaccactgacacacacagcctcacctcagaggaagggtccagcaggtccact
aagctgactgtagatgccgggtctcttcagtctgtgtgtgctgcatctggtcaccacggc
ccccccaccaacactaacaccaacaccactggctgcccctcctatagccgcctgtccact
gcctcctactgcatgtcattggatgaggagcaagacgcaacgatgacctcacaggaagtc
gcccagtacctggaactcagccccagggccgagaagcacagcaccacgttggagaatcct
cccgcctcctccctgtctcgcaccttttcccccactcccaccctgggctatatctatggg
cccctcccctccgaccaactggaggacgggatgactgacgaacaggagccaatgggcccc
cgacgggcccggtttcagagcacgccctcgtcgctctgcagcgaatgggagggttcgctg
tggaacggctggggctcggtgtcagagggaaacatggcgaacagcacccgcaacagcttc
atcagctcgtcggatggctcattcatgaacgacgccaactttgcccgcgtgctcgccact
gtggccgccgagtccatgagtgaagcctccttctcagacttctctcccccggcgtcgccc
ctcagtgccctgttccctccagctcgaggggaagaagaggagtgtttcggggagctggac
cccatgcccgtttgggactggagcacagcttgggttgaggagatggaggcgcagtaccgt
gcacagtacccctctcaggcagcagcaacccccgcttgcaacacctgggggcgttgccgt
gacgatcttcactatgacaaccgccgagccacaggagggagtaggggcgaaggacgaggg
ggggtgaggacgaccccacaccgatga
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