Salvelinus namaycush (lake trout): 120031368
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Entry
120031368 CDS
T07522
Name
(RefSeq) gasdermin-E-like
KO
K22146
gasdermin-E
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
120031368
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120031368
Transporters [BR:
snh02000
]
Other transporters
Pores ion channels [TC:
1
]
120031368
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Dredd_2nd
Motif
Other DBs
NCBI-GeneID:
120031368
NCBI-ProteinID:
XP_038833015
UniProt:
A0A8U0TYW5
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All DBs
Position
Sna37:complement(27596183..27613425)
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AA seq
483 aa
AA seq
DB search
MFAKATKAFVKDTDHEGRLIPVSSLNDTDELNLRSLIVKTRHRCFWQEPKYQSPGFTLGD
VLKPGEPGNTPLSPTVKESDFVDYSGTFGDKKEMNADGNVEAKLADFNITVGGKWSTKQK
LSLGSLNKEKVDVKDLHNYSKNRVLDMSHPVIKQTRVNPRAVLGVLTERIMTSLPCPVTN
NVRKRGNVGANVSACVFLSGKASMKQSGSTQTDSDVSLGIPANTVMAYSLIELYVKCNGQ
FELCLICNNGGFEIDKSKDGMEVDGIMDLGGDFHANSPLNLNEELEKLSGHFQLLSVLPA
ATRSSLLQLLKTTMEDREAVSVLESVLDQMCDGETPDLGDLEESERETVQAVLDLVDQCV
GKDEDEIRSSLLSAVHLIVSAFDGMTDVGLSVLGSCCSPPVLQALQILVHHVAAGSGETL
SLRDAGLAVLTEEEVYQRTESLFGHSTVTLKREEDTLRTEMQDQPGYLPLVMSITVKGLA
SLV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaagccacaaaagccttcgtgaaggacacagatcatgagggacgcctgatc
cctgtgtccagtctgaatgacacagacgaactgaatctccgatcactcattgtcaagacc
aggcacagatgcttctggcaggaacccaaataccagtcccctggctttaccctcggtgat
gtcctgaagcctggagagcctggaaacacacctttaagcccaactgtcaaggagtctgac
tttgtggactacagtgggacatttggtgacaagaaagaaatgaacgcagatgggaacgtg
gaggcaaagttggctgatttcaacattaccgtgggagggaaatggtccaccaaacagaag
ctgtcccttggcagcctgaacaaagagaaggttgatgtgaaggacttacacaactactca
aaaaacagagttctggacatgtcccatcctgtgatcaagcagacccgtgtgaatcccaga
gcagtgttaggcgtcttgacggagaggattatgacgtcactaccttgtccggtcacaaac
aatgtccggaagcgtggcaatgtaggagccaacgtgagcgcctgtgtattcctgagcggg
aaggcctctatgaagcagagcggcagtactcagacagatagtgatgtgtcactgggtatt
cctgcaaatactgtcatggcctacagtctgattgaactctacgtcaaatgcaatggacag
tttgagctgtgcctcatctgcaacaatgggggctttgaaatagataagtcaaaggatggg
atggaagtagatggaattatggacctgggaggcgactttcatgccaacagccccctaaat
ctgaacgaagaactggagaaactgagtggtcatttccagctgctgtcagtcctgccagca
gccacacgttcctctctgctccagctcctcaagacaaccatggaggacagagaggcagtc
agtgtgctggagagtgtgctggatcagatgtgtgatggtgagactcctgacctgggtgat
ctggaagagtctgagagggaaacagtccaggccgtactggatcttgtagaccaatgtgtt
gggaaggatgaggacgagatcagatcctcacttctcagtgccgtccacctcattgtcagt
gccttcgacggaatgacagatgtgggtctctctgtgttgggatcgtgttgcagtcctcca
gtcttacaggccctgcagatcctggtgcatcatgtggcagcagggagtggagagaccctc
tctctgagagatgcaggtctggctgttctgactgaggaggaggtgtatcagaggacagag
agtctctttggtcactctacagttacactgaagagagaggaggacacactgaggacagag
atgcaggaccagcctggataccttcctctagtcatgagtatcactgtgaaaggcctggcc
tctttagtgtaa
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