Salvelinus namaycush (lake trout): 120031411
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Entry
120031411 CDS
T07522
Name
(RefSeq) HMG box transcription factor BBX-like isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120031411
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120031411
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GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
120031411
NCBI-ProteinID:
XP_038833079
UniProt:
A0A8U0TXQ8
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Position
Sna3:complement(41304277..41332274)
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AA seq
891 aa
AA seq
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MKGGGRGKEPPVEVEVSGKRPKRKCLQWHPLLSKKALDFSEEEEEEDEEELEKPLLVRES
RGPEVACGGPMEVEEDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWW
AVLEPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKSPCHTVSNARKKVWSFPSNS
PKGCATAKKVPKTDSTPQLNFAMADPTKMGGLSMLLLAGEHALTAREISSSSSKSGATDV
TKQPENSSLFQLAEISSSTLQPSLTDTADEGKPLSRGDQAETWSGTSQQGKSDVPKDKSP
LFQLAEQISSDSSQSTAPEGKQCSQSALFQLAEMCLASEAGKMETQDDTCAPHIKTETVV
KEDTGGNITDFPLSSPPSSSASSSSTPTNASPPLLSGQAASVKKKKKKKEATAREPPKAV
DKDKIPRPGSPKKTLKKRPSSESELESLLYTIEAVAKGAWGDAEEDIPKKKASTAVVTIP
REPSSPKKKSKAKRPLKAKEEDEMEEDGRRTELPSIVETAANLASPKTEAEEASIGSTPD
PLGSTEKPNAPPSPPHIKHKVEEKQREAEANAEGCGSRKSERSCKGALYKTLVSEGMLTS
LRANVDRGKRGSFRSGSDEGGWTDETWAFSQMGPTNPKKLKKSKSKDETAPGLGKLEEEF
EKKFNSLPQYSPLTFDKKSTTVTKKKKTDVSTAPEEQPPKPAKGPSSSQKKTLFHKIVSK
YKQKKEKPNTVDKDIAMHSDSPMSDSAAKAKQTPAPCATATPSPEAMGTSASMPVGSQKR
KARKSKITHLVRSADGRVSPAEEDKVRDLTPEQDDKPLPRETLCNETECYSAPKQEEADR
SSAPEVLPAFFSLSALAEVAAMENIHRGQRVIGDSQKEMAQTPVLISCADQ
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggaggaaggggtaaggagcctcctgtggaggtggaggtgagcggcaagcgg
cccaagcgcaagtgtctacaatggcacccgctactctccaagaaggccctggacttctcg
gaggaggaagaggaggaggacgaagaagaactggagaagccattgctggtcagggagagc
cgggggccggaggtggcatgcggggggcccatggaggtggaggaggactcttcagagcag
cgggcccgccggcccatgaacgccttcctgcttttttgcaagcgccaccgttcactggtg
aggcaggagcaccctcggctggacaaccgcggtgccaccaagatcctggctgactggtgg
gctgtgttggagcccaaagagaaacagaagtacacggacatggccaaggagtacaaagat
gccttcatgaaggctaacccaggctacaagtggtgccccaccaccaacaagccagtcaag
agcccctgccacactgtcagcaacgcacgcaaaaaagtgtggtccttcccttccaactct
cctaagggttgtgccactgccaagaaagtgcccaagactgacagcacaccacagcttaat
ttcgccatggcagatcccacaaagatgggtggtctaagcatgctactgttggctggggag
catgcccttactgccagagagatttcctccagttcttcaaagtctggagccacagatgtc
acaaagcaacctgagaactcctccctattccaacttgctgagatctcctctagcacgctt
cagcccagtttaacggacacagctgacgaggggaagcccttgagtcggggggaccaggca
gaaacgtggtctggcacctcacagcagggaaagtctgacgtacccaaggataagtcccct
ctttttcaactggcagagcagatctcctctgattcaagccagtcgactgcaccggaggga
aagcagtgtagccagtcggctctcttccagctcgctgagatgtgtttggcctccgaggca
gggaagatggagacacaggacgatacctgtgccccacacatcaaaactgagacggtggtc
aaggaggacactgggggcaacatcaccgattttcctctttcctctcccccgtcttcctcc
gcttcttcctcctccacgcccaccaacgccagtcccccgctgctcagcggccaagcagcc
agcgtcaaaaagaagaagaagaagaaagaagctactgccagagagccacccaaagcggtg
gacaaagacaagatccctcgtccgggctcgcccaaaaagaccctcaaaaagcgaccatcg
tctgagtctgagttggagagcctcctctacactatcgaggccgtggctaaaggggcctgg
ggcgacgccgaggaggatatacccaagaagaaggctagcaccgccgtcgttaccattccg
agagagcccagctcacccaaaaagaagtccaaagccaagaggcccctgaaggctaaggaa
gaggatgagatggaggaggatggaaggcgcacagagctgccatcgatagtggagacggca
gcgaatctagcaagccccaagacagaggctgaggaggccagcatcggcagcaccccggac
cccctgggcagcacggagaagcccaacgcccctcccagccccccgcacatcaagcacaaa
gtcgaggagaagcagagggaagcggaggccaacgctgaagggtgtggctccaggaagtct
gagagaagctgcaagggggcgctgtacaagaccctggtgtcggaagggatgctgacctca
ctgagggccaacgtggacagaggcaaaagaggctcttttcgaagtggatctgatgaaggg
ggctggactgacgagacctgggctttctcacagatgggacccactaatcccaagaagcta
aagaagtcaaaatccaaagacgagacggcgccaggtttggggaaactggaggaggagttt
gagaagaagttcaacagcctgccgcagtacagccctctgacgttcgacaagaaaagcacc
accgtcaccaagaagaaaaaaacagacgttagcaccgcaccggaggaacaacccccaaaa
cctgccaagggtccatcttcatctcagaaaaagactttattccacaagattgttagcaag
tacaagcagaaaaaggagaaacccaatactgtggacaaagacatagcgatgcatagtgac
tcccccatgtcagactcggctgccaaggccaagcagacccccgccccatgtgccaccgcc
acgccttccccagaggccatgggaactagcgctagcatgccggtgggcagccagaagagg
aaggctaggaagagcaaaataacccacctggtgcgctcggccgacggcagggtgtcccca
gcagaggaggacaaagtcagggacctgaccccggagcaggacgacaagccattaccccga
gagactttatgcaacgaaacagagtgctacagtgcacccaagcaggaggaagcagataga
agcagtgcacccgaagtcctgcccgccttctttagcctgtctgcccttgccgaggtggca
gccatggagaatattcacagaggccagcgtgtgattggcgatagccagaaggaaatggcc
cagacccctgtcctcatctcctgcgctgaccaatga
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