Salvelinus namaycush (lake trout): 120031418
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Entry
120031418 CDS
T07522
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04514
Cell adhesion molecules
snh04810
Regulation of actin cytoskeleton
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120031418
04514 Cell adhesion molecules
120031418
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120031418
09142 Cell motility
04820 Cytoskeleton in muscle cells
120031418
04810 Regulation of actin cytoskeleton
120031418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120031418
Cell adhesion molecules [BR:
snh04515
]
Integrins
Integrin alpha subunits
120031418
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
120031418
NCBI-ProteinID:
XP_038833085
UniProt:
A0A8U0PXS6
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Position
Sna37:complement(15844600..15926982)
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AA seq
1056 aa
AA seq
DB search
MCAYRMCAFGGMLCRVVSVLWLVLSVVSGFNLHAERPAVYGGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPPNPDPTKLPYSCTQIPFDNANNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKVNGEKDPVGTCYVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVPGEKHTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYL
YLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIY
NGQRDLTARGLTLSQELYGAWASSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSV
YRARPVVSVEAEMILTPRIMNPDDRSCLLTESDTMVTCLRVDICAKVSGVGIPDSVVLNA
ELQLDWLKGVRGGVKRVHFLNSHQPQHTGVLTFGHSRPHSCLNYTVYLREEDEFRDKLTP
ISLALNYSLAPPSNLDLPPVLNRYSSTFLQEQAYILLDCGEDNECIPDLQLSASMDRTEL
VVGDDNLVMLTINAVNNGEGAYETELHTLLPPEADYIGVERRIESLSRLNCEYRMVNDSR
LVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDNSKSNPVSLSLSIS
ARAQLDLRGVCHPSQVVLPFPHWEPKEKPVKEDDVGPQVTHIYELHNSGPSSIREAELQV
GWPSRFRDEHLLYALEVLTEGPISCRSNTSLNPLGLQMSSVQDTPELLGFLRNSSSPHRY
RRATSAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYL
LNSTVSFRVTALPYRLQPSSLPQHTTSMGTLVLWGTPDVAFAVPLWVIILAILLGLLVLA
MLTLAMWKCGFFDRARLPADDVSDREQLTSDQLADA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcctataggatgtgcgcgttcggtgggatgttgtgtcgcgtggtgtcggtgctg
tggctggtcctttcggtggtctcggggttcaacctgcatgcggagcgcccggcggtgtac
ggaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacgtcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccccaaaccctgaccccaccaagcta
ccctacagctgcacacagatacccttcgacaacgccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtctcaccagtggtttggagcctcagttagaact
cacaaaggcaaagtggtggcctgtgctcctctctaccactggcgtacagtgaaggtgaac
ggtgagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctacgca
gaatactcaccctgtaggaccaatgatccagacccagagggacagggtttctgccaggcc
gggttcagtgtggacttcaccaaggaggggacactggtggtgggcggacctggcagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctg
aaagccgtgctcaggagagtccctggagagaaacacacacacgctgcagctgatacccat
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctgatagctggggttccgagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtggctgttactgacctcaatggagacgggtatgatgatgtactggtaggagcc
cctctctatatggagagagagagggagagtaagcccaaggaggtgggccgtgtctatctg
tacctccagcactccccgctcaccttctccgagcccctcctcctgacgggaacacacacc
ttcggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaac
gacgtggcagtgggttgtccgtttggaggggaggaccggagtggcctggtgttgatctac
aatggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcc
tgggcctccagtagtggcctctccggctacggcttcaccctgaggggggacagagacctg
gacaacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtg
tacagggctcgtcctgtagtgtcagtggaggctgagatgatcctgactcctagaatcatg
aaccctgacgaccgatcctgcctcctgacagaatctgataccatggtaacctgtctcagg
gtagatatttgtgcgaaggtgagcggtgtggggatcccagactctgtagtcttgaatgca
gagctgcaactggattggctgaaaggtgtgaggggcggagtaaagagagttcatttcctg
aattcccatcagccccagcacacaggggtcctaacttttggccacagccgtccacactcc
tgcctgaactacactgtctacctacgagaggaggatgagtttagggataaattgactccc
atttcattggctctgaactacagtttagcccctccttccaacctggatctcccccctgtc
ctcaaccgctacagcagtaccttcctgcaggaacaggcgtatattctgctggactgtggg
gaagacaatgagtgtattccagacctccagctgtctgcaagcatggaccgtacagagctg
gtggtcggggatgacaacctggtcatgttgaccataaacgcggttaacaacggagagggg
gcatatgagacagagctacacacactcctaccccctgaggctgattacataggagtggaa
cgcaggatagagtctctatccaggttgaactgtgagtacaggatggtgaatgactccaga
ctggtggtgtgtgacctggggaaccctatggttgctggaacagaagtatctgtaggttta
aggtttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacagatc
cacagttcaaacaaagacaactccaagagcaacccagtcagtctgtctctctccatctct
gccagagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgttt
cctcactgggagcccaaagagaagccggtcaaagaggatgacgtaggaccccaggtcaca
cacatctacgagctccataactcaggtcccagtagtatcagggaggcggagctccaggtg
ggctggccctctcgtttccgtgacgaacacctgctctacgctctggaggttctaacggaa
ggaccaatcagctgccggagcaacaccagcctcaaccccctgggcctacagatgtcctct
gtccaggacactccagaattgttgggctttctgagaaacagtagctctcctcaccgctac
agacgagccaccagcgctgcccagccttacagcagcaagaccctgaactgcagtaacatc
atttgtctaagagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgtagtc
aagatccgctcccgactctgggcccacaccttcctccagagacgtaacgacccatacctc
ctcaactccaccgtgtccttcagagtgacggccctgccctaccgcctccagccctcctcc
ttaccccaacacaccacttcaatgggtacactggtgctgtgggggactcctgatgtggcg
tttgctgttcctctgtgggtcatcatcctggccatcctactgggactgctggtcctggcc
atgctaacactggccatgtggaagtgtgggttctttgaccgggcacggctgccagcggat
gacgtgtcagaccgtgagcagctgacctctgaccaattagcagacgcctaa
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