Salvelinus namaycush (lake trout): 120031426
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Entry
120031426 CDS
T07522
Name
(RefSeq) RNA-binding protein 8A-like isoform X1
KO
K12876
RNA-binding protein 8A
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
snh03015
mRNA surveillance pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120031426
09122 Translation
03013 Nucleocytoplasmic transport
120031426
03015 mRNA surveillance pathway
120031426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120031426
03041 Spliceosome [BR:
snh03041
]
120031426
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120031426
Spliceosome [BR:
snh03041
]
Complex C
Other components
EJC/TREX
120031426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
120031426
NCBI-ProteinID:
XP_038833096
UniProt:
A0A8U0PVY7
LinkDB
All DBs
Position
Sna37:12081562..12085169
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AA seq
175 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAKRRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKSKRRSGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactagatcttcacgaagcgggaggcgaggattttgctatggatgaggat
ggtgatgacagcatccacaagttaaaggagaaggcaaagaggagaaagggaagaggtttt
ggttcagaggagggagcgaggtccagagtgagagaggactatgatacagtggagcaggat
ggagacgagccaggtcctcagagatctgtggagggttggattcttttcgtgactggggta
catgaagaggccactgaggaggacatccacgacaagtttgcagagtttggagagatcaag
aacctacatctgaacctggaccgaagaacgggttacctcaagggttatacgctggtggag
tatgagacatacaaagaagcccaggcagccatggaagggttgaatggccaggacatgatg
ggccagcctatcagtgtggactggggctttgtcagaggaccacccaagagcaagaggagg
agtggtggacgtagacgcagcaggagtccagacaggagacggcgttga
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