Salvelinus namaycush (lake trout): 120031454
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Entry
120031454 CDS
T07522
Symbol
tex10
Name
(RefSeq) testis-expressed protein 10 homolog
KO
K14827
pre-rRNA-processing protein IPI1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120031454 (tex10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snh03009
]
120031454 (tex10)
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
120031454 (tex10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
HEAT_EF3_N
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
120031454
NCBI-ProteinID:
XP_038833147
UniProt:
A0A8U0PXT0
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Position
Sna37:31437146..31458149
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AA seq
942 aa
AA seq
DB search
MTKCKKKKRQDDFQKVKLKVGKTKPKADNATNINFRTKGINLTEQLKKDANAPTTHRKLN
IKDLLSQLHHYSGTVKQGALVGLRELLTLHPSELDQHLSSLLSEAAAVFTDKDANVRMSA
TRLLRFIAQSVPAERTSPFFPLLSAHLSCAMTHIETGIQEDALKVLDVLLDHYPALLAAR
PALLLTNFLELISHKSTGGGARKGLEGKGRSWALSVNPNRNVTGQQWRLTVLLRLGRFLQ
AVVEERRAEEGVACVSGDMFSVLNGQGGANAPLELNWEELTYRKDGFRVFEHSGAMPTPH
STFKLRPETEPGAGVSEGLGTGEAVRGFASTLVPLLLDVWVEASASDRSKTDSAHLLTPD
AMSLMYQVLSILQLLRKLAPQREHQDTLDAWFRSEYLGDFKQHFMKNFPYGNLDTPKQRR
KTDPKRSKQAPTIPGQTVEPLALNVLLCQVMVSMVTLSQREGQAQEPDAEWLMPLRGFVQ
ETLSSGAKLSQRHLHTLLETVWRMAITQRSRAVTEDLLQAVYVQYQQMNLNLQTRTLLLS
FYSRLYLQEHNHTHIARSRVLSRWLAALPLQLSQLGHRNPALSDRLLLSIQAAASRGNKA
LLNSLHTHACRLYDPQEGSVVLLPAESQQRLVQLLYFLPVMSQGLLANLSRCCTAGRVSA
GLAASLIRIIHLRSSLSGWSVGSQDTTLRDVDYISFLFSTLTGFSSDELATLQEAGDESV
LPPSPLSPLSLYPTPLEQFTHHWDVVEEVCHCLETLGSRSQCFDVLQNGICKNLTGLAVV
PDSMAAGLLRAVARLLDLSFLPSEPLLRFLSRCCLSLLSLLLTLQQDTASENNHKREAVW
GACVAALSSIPRLLRLVLQSLRVMDLCEEELPQLAQILSLLLQHTALRNHMLANATLLQH
IIQDLTRYCRGESKEQWMTDLLYCYSVTMATHRGNLGLRDIY
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtgcaagaagaagaagaggcaggatgacttccagaaggtcaagctgaaggtg
gggaagaccaagcctaaagctgacaatgccaccaacatcaacttccgcaccaagggaata
aacctaactgaacagctgaagaaagatgctaatgcacccaccacacaccggaagctcaac
atcaaggacctgttgtcccagctgcatcactacagtggtacagtgaaacagggagctctt
gtgggactgagggagctgctgacccttcacccctcagagttagaccaacacctctccagt
ctgctcagcgaggctgctgccgtcttcacagacaaggacgcgaatgtacggatgtctgcc
acacgcctactcaggttcatagcccagagtgtgccagcggagcggacgtctccattcttc
cctctcctctctgcccacctctcctgtgccatgacccacatcgagacgggtatccaggag
gatgccctgaaggtcctcgacgttttgctggaccactatcctgccctgctggctgctcgt
cccgccctgctgctcaccaacttcctggagctgatctcacacaaaagtaccgggggcggg
gcaaggaaggggctggaggggaaggggaggagctgggccctgtcagtcaaccctaacagg
aacgtgactggtcagcagtggagactcacagtgctgctcagactggggcgttttcttcag
gcggtagttgaggagaggcgagcggaggagggggttgcatgtgtctcaggtgacatgttc
agtgttttgaatggacaaggaggagctaacgcacctttggagctcaactgggaggagctt
acctacagaaaagacggatttcgggtgtttgaacattcaggagccatgcccactccgcac
tccaccttcaaactcaggccggagactgagcctggggctggggtgagtgaggggctgggc
acaggggaggctgtacggggctttgcctccaccctggtgccccttctactagatgtctgg
gtagaggctagtgccagcgaccggagcaagactgacagtgctcatctcctcacccccgac
gccatgtcactgatgtaccaggtcctctccatactacagctgctacgcaagctggcacca
cagagagaacaccaggatacattggatgcgtggtttcgcagtgagtacctgggggatttt
aagcagcacttcatgaagaacttcccctatggaaatctggacacccctaaacaaaggcgg
aagacagaccccaagaggagtaagcaggcccctacaatcccagggcagacagtggaaccc
ttggctctgaacgtgctgctctgccaggtcatggtttccatggttaccctcagccagagg
gaggggcaagcccaggagcccgatgctgagtggctgatgcctctgagagggtttgtccaa
gagactctgtccagtggggccaagctgagccaaagacatctacatacactcctggagact
gtctggagaatggccatcacacaacgcagcagggcggtgacggaggatctgttacaggcg
gtgtatgttcagtaccagcagatgaacctgaatctgcagaccagaacactgctactttcc
ttctacagcagactgtacctacaggaacacaaccacacacatatcgccaggagtagagtg
ttgtctcggtggctggctgctctaccgctccagttgtcccagctgggccaccgtaaccct
gccctctcagacaggctcctgctctccatccaggctgctgcctcccgcgggaacaaggct
ctgctgaactccctacacacacatgcatgcaggctctacgacccacaggagggcagtgtg
gtattgttaccggctgagtctcagcagcgattggtccagctactctacttcctgcctgtg
atgtcacagggtctattggccaatctgagtcgctgctgcactgcgggacgtgtctctgcc
ggcctggctgcctccctcatacgcatcatacacctcaggtcctctttgagtggctggtca
gtagggtctcaggacacaaccctgcgtgatgttgactacatcagcttcctgttctccacc
ctcacagggttttcgtctgatgagctggccaccctgcaggaggctggggatgagagcgtg
ctccctccctcccccctctcccccctcagcctctaccctacccccctggagcaattcaca
caccactgggacgtggtggaggaagtgtgccactgcttggagacgctggggtctcgttca
cagtgctttgatgtgctccagaacggcatctgcaagaacctgactggtctggctgtggta
ccagacagtatggcagcagggttgttgagagcggtggccagactgttggacctgtccttc
ctccccagtgaacctctgctgaggttcctgtcccgctgctgcctcagcctactgtctctg
ctactgaccctacagcaggacaccgcctcagagaacaaccacaagagggaggcagtgtgg
ggcgcgtgtgtggcagcgctgagcagcattccccggctgttgcggttggttctgcagtcg
ttgcgagttatggacctgtgtgaggaggagctgcctcagctggcccagatactgtccctg
ctgctgcagcacacagcgctacgcaaccacatgctggctaacgcaactctactacaacac
attatacaggacctcacgaggtactgtcgaggtgagtccaaggagcagtggatgactgac
ctgctgtactgctacagcgtaaccatggcgactcaccggggaaacctggggctccgagac
atctactga
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