Salvelinus namaycush (lake trout): 120031458
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Entry
120031458 CDS
T07522
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120031458 (cdh17)
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Major cadherins
120031458 (cdh17)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
RET_CLD1
RibLong
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
120031458
NCBI-ProteinID:
XP_038833152
UniProt:
A0A8U0PZD5
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Position
Sna37:31346265..31386648
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AA seq
865 aa
AA seq
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MAIPIIHLLLLSLLIATAAGKGLEKGPLENKVLDVPEGTPVPYALYQFQASHLEVDGFRL
TGETEGKISISEDGWLYLEQTLDWAHTQTHTLELEALVGSEPVEGPVSITINVLDVNNHA
PSFNQTDYIGIVKERTPAGVPFARVFATDLDDPESPNAHLSYTLVSQIPNRDNTLFFQIN
SNTGEISTTAEGERLLKARESVIHSRGGDFSDSLKKRFDDYCTPTKDIPYELNPFYSCVQ
RAESRRLNPLEDPDFTLIVRVEDMGGESVNALNGNARVKIVVQENLWVNPGPINLREQLK
GIYPMHIGKVQSNDPSAFYRLVQKERELTFPFNVTEEGDILLTEELDREDKAMYILVVFA
EDSYGNQVDPPLEVQVVVDDVNDNAPICEEELSVFEVQENEPTGSPVGHLMVHDADDDNT
PNALLSYSLVSQTPSSVFTIDGISGRIQAKQMLQRKDATEYHLTVRVNDPGFSTECKVLI
KVIDINNELPIFEMNDYGSHNLSEDTALGHTLLTVKAIDADDPGTGSSRIEFHITAGNED
GVFAMETGDNGEGRLVVAKPLNYETASSYKLQIDARNPEPLVSGLEYGAESSAVVSVAIS
DVDEAPVFDMDILDVTVPEDTKEGATLLKIDAKDPEGKEILFKMEGDTKGWLEIDPATGE
IKIKNKAVLDRETVEAFHFTVVAFEKANPELSSEREVSVRLLDVNDNVPKLTENQAFICV
KKPQPIVLTALDADADPFGAPFTFSLAQGKKSPNWDLSAVDGTSAKLTLKKSPSEDKTFL
IPINIKDNAGMGITQKFEVRVCNCTELGYCFTEPGVHAGVLGMPTTIGILAGTVGFIALV
LIIAFHRIKKDNQKKALLGETDAIL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcccataattcacctgctgctgctcagtctcctcatcgccactgctgctggg
aaaggcctggagaagggaccactggagaacaaggttctagacgtaccagaggggacacct
gtaccttacgccctctaccagttccaagcgtcccacctcgaggttgatgggttcagattg
acaggagagactgaaggaaagatcagcatctcagaggacggctggctctacctggaacag
accctggactgggcccacacacagacacatactctggagctggaggccttagtgggttca
gaaccagtagaaggtccagtcagcatcaccatcaacgtgttggatgtcaacaaccacgcc
ccctccttcaaccagacagactacatcggcatcgtcaaggaacgtacccccgcaggtgtt
ccatttgcgcgtgtgtttgctactgacctggacgacccagagtctcccaacgcccatctt
agttacaccctggtctcccagatccccaacagagacaacaccctgttcttccagatcaac
agcaacacaggagagatttctactactgccgagggagagcgtctgctgaaggccagagaa
agtgttattcattccagaggaggggacttcagtgattctctgaagaagaggtttgatgac
tactgcacccccacaaaggacatcccttatgaactcaaccccttctacagctgtgtgcag
agagcagagtctcggaggctgaaccctctggaagacccagacttcacgctgattgttcgt
gtggaggacatgggcggggagtcggtgaacgctctcaacggtaatgcgagggttaaaatt
gtcgtgcaggagaacctgtgggtcaatcctggaccgatcaacctcagagaacagttgaaa
gggatataccccatgcacatcggcaaggtccagtctaatgatcccagtgccttctacagg
ctggtacagaaagagcgggagctgacgttccccttcaatgtcacagaggaaggagacatt
ctgctgactgaggagctggacagagaggacaaggccatgtacatcctggtggtgttcgct
gaggatagctatggtaaccaggtagaccctcccctggaggtgcaggtggtggtggacgat
gtgaatgataacgctccaatctgtgaggaggaactcagtgtgtttgaagtgcaggagaac
gaacccacaggcagcccagttggacatctgatggtgcatgatgctgatgatgacaacaca
cccaacgcgctgctctcctattcgctggtgtcccaaaccccttcctccgtctttaccatc
gatggcatcagcggccgcatccaggccaagcagatgctccaacgcaaagacgcaacagag
taccacctcactgtcagagtaaacgacccaggtttcagcacagaatgtaaggtcctcatc
aaggttatcgacatcaataatgagctgcccatctttgagatgaatgactatggtagtcac
aacctgtctgaagacacagctctaggccacaccctcctgacagtgaaagccatagacgct
gacgaccctggaacaggaagctcccgcattgagttccacataaccgctggcaacgaagac
ggagttttcgccatggagacaggcgacaatggggagggcaggcttgttgttgctaagcct
ctgaactatgagactgcttcatcctataagctacagattgatgctcgtaacccagagccg
ctggtgagcggtctcgagtacggcgctgagtcgtccgccgtggtctcggtggcgatcagt
gacgttgatgaggctccagtgtttgacatggacattctggatgtcacggtgccagaggac
accaaggagggagctacgctgctcaaaatagacgccaaggacccagagggcaaagagata
ctgttcaagatggagggagacactaagggttggttggagattgatcctgctactggagag
ataaagataaagaataaagctgtgctggacagagagacggtggaggccttccactttact
gttgtcgccttcgagaaagccaatccagagctgtcctcagagcgcgaggtgtctgtgagg
ctgctggatgtgaatgacaatgtccccaagctgacagagaaccaggccttcatctgtgtg
aagaagccccagcctatagtcctgacggccctggacgcagacgcagaccccttcggagca
cctttcacattcagcctggcccagggcaagaagtcccccaactgggacctaagcgctgtg
gacggtacgtctgctaaactgaccctgaagaaatctcccagcgaggacaaaaccttccta
atccccatcaacatcaaagacaatgctggcatgggcatcacacagaagtttgaggtgcga
gtgtgtaactgcacagagctgggatactgtttcaccgagccaggcgttcatgcaggggtg
ttaggaatgcccaccaccatcggaatcctggctggaactgtcggattcatcgccctggtc
ctgatcatcgctttccatcgtataaagaaggacaaccagaagaaagccttgctgggagaa
acggacgccattctctag
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