Salvelinus namaycush (lake trout): 120031486
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Entry
120031486 CDS
T07522
Name
(RefSeq) PR domain zinc finger protein 1-like
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120031486
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120031486
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GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-met
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
120031486
NCBI-ProteinID:
XP_038833191
UniProt:
A0A8U0TZ70
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Position
Sna37:14036510..14048281
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AA seq
833 aa
AA seq
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MCGWDQSFSATSHSSAMLTTEGAHTVEHDNVKMDTEPHRDTETQMDMGSKMATDTDSKME
EADMMKWTEAEFEEKCTYIVKDTLREAGTESEGLTRAEASLPRNLAFKQLADSKEVIGVA
SREYVPKGTQFGPLVGQIYTADSVPKDANRKYFWRIYSEGDFHHFVDGLDEERSNWMRYV
NPAHSAGEQNLAACQNGTNIYFYTVRAIPPGTELLVWYCPEFAHRLHYPPSGELMMQKLK
QSLLEAKQQASEEHVSSSSAPVKIEHSVSSILRGPTTSSKKEPSRPLATRPRCADSPDRP
LYPHALYPPFRPHPHLTEEFLSLKTSPVQFGYTAIRSPGNQSSATPSPSARSSLESSPDG
SPAAPQPTPPSSSFYRRGLGPFPGYPPPAASLSSPFYPPGPHYSRYMLPHHYPLPGGGVP
AVGGMFPRMYPLFSSLLPPNMPLLPGEAGSRFLLPDSSHPSFSTHRDFLLSAPTSAFSAA
TTLKDKVGPHYPHHPYSGHAHPHPHGHPHAPTSGSPTAGTAAPSERVPTKPTSALLGSAS
GRQEEEAMNLSKMKRGGGSTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVH
SGERPFKCSTCSKGFTQLAHLQKHFLVHTGEKPHECSVCHKRFSSTSNLKTHLRLHSGEK
PYSCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLCSLRLHLKGYCLAAVTSG
GPTPSPSTQEELQRINEEIERFDMSDHAERLDQLQGGVEVEAVLEKQVLGMLWREMDLKT
SGYHHHKGGASELQSTGYGLYNSGNETSVIKLRRSTPLLPSNVTIKQESEEQA
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctgggaccaaagcttctcggctacctctcatagctcggccatgttgactact
gagggggcccacactgtagagcacgacaacgtcaaaatggacaccgaaccccatagggac
acggaaacccagatggacatgggatccaaaatggccaccgacacagactctaagatggag
gaggcagacatgatgaagtggacggaggcggagtttgaggagaagtgtacctacatcgtc
aaggatactctgcgggaggcagggacagagagcgaggggttaacgagagcagaggcctca
ctgcctcgtaacctggccttcaaacaactagctgattccaaagaggtgattggagtggcc
agcagagagtacgtccccaaaggaacacaattcggccccctggtgggtcagatttacact
gcagacagcgtccccaaagacgccaacaggaagtacttctggaggatctactcggagggc
gacttccaccactttgtggacggcctggacgaggagcgttctaactggatgcgctacgtc
aacccggcccactcggcgggggagcagaacctggcggcgtgccagaatggcacgaacatc
tacttctacacggtgagggccatcccccctggcaccgagctgctggtgtggtactgccca
gagttcgctcaccgactccactacccgccctctggagagctcatgatgcagaaactcaag
cagtctctgctggaagccaagcagcaggccagtgaggagcatgtcagcagcagcagcgcc
ccagtcaagatagaacacagtgtctcctccatcctcaggggccccaccacctctagcaag
aaggagcccagccggccactagccacgcggccccgctgtgctgacagccccgatcggccc
ctgtacccccacgccctctaccccccattccgcccccaccctcatctaacggaagagttc
ctgagccttaagacaagcccggtacagtttggttacacagcaatcagatcaccaggcaac
cagtcgtcggcgaccccgagtccgtcggcgcggagcagtctggagagtagccccgacggt
agccccgcagctccccaacccacacccccatcctcctctttctaccgccgaggtttgggc
cccttcccaggctaccctccgccagccgcctccctttcctcgcccttctaccctcccggc
ccccactactcccgctacatgctaccccaccactacccactacctgggggtggggtgccc
gctgtcgggggcatgtttccaagaatgtaccctctcttcagcagcctgctgccccccaac
atgcccctgctgcctggggaggcggggagcaggttcttactacctgactcctcccacccc
tcattctccacccacagggacttcctcctctccgcccccaccagtgccttctcagccgcc
accaccctcaaggacaaggtcggcccccactacccccatcatccctactctggccatgct
catcctcacccacacgggcacccccacgcccccaccagcggctcccctacagcgggcacg
gcggcccctagcgagcgagtgcccaccaagcctacctcagctctactgggcagcgccagc
ggccggcaagaggaggaggccatgaacctgagcaagatgaagcgtggtggtggctctaca
ggctacaagaccctgccttacccactcaagaagcagaacggcaagatcaagtacgagtgt
aacgtctgcagcaagaccttcggccagctctctaacctcaaggtgcacttgcgtgtccac
agcggtgagcgacctttcaagtgttcgacctgcagtaagggcttcacccagctggcccac
ctgcagaaacacttcctggtgcacactggagagaagccccatgagtgctcggtgtgccat
aagcgcttcagcagcaccagcaacctaaagacccacctgcgcctccactcgggtgagaag
ccctactcgtgcaagctctgccctgccaagttcacccagtttgtccacctcaagctgcac
aagcgccttcactcccgtgagcggccacacaagtgcccccactgccaccgccactacatt
cacctgtgcagcctgcggctacacctgaagggctactgcctggctgccgtcacctcaggt
ggccccacccccagcccctccacccaggaagagctccagcgcatcaacgaggagattgag
cgctttgacatgagtgaccacgctgagaggctggaccagctccagggaggggttgaggtt
gaggctgtcctggagaagcaggtcctggggatgctgtggagggagatggacctcaagacc
tccggctaccaccaccacaagggcggcgccagtgagctccagtctacaggttacggcctg
tacaattcaggaaatgagacgtcggttatcaaactgcgccgaagcactccacttcttccc
tccaacgtcacgatcaagcaggagtccgaggaacaggcttga
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