Salvelinus namaycush (lake trout): 120031499
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Entry
120031499 CDS
T07522
Name
(RefSeq) semaphorin-6D-like
KO
K06842
semaphorin 6
Organism
snh
Salvelinus namaycush (lake trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
120031499
NCBI-ProteinID:
XP_038833208
UniProt:
A0A8U0TYK6
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Position
Sna37:13455942..13501305
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AA seq
1106 aa
AA seq
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MRLVPGSPRPLPLLEVGLALALTALLPHLAMGVTPFPQDLEPISIVGREHSYLYPSFHGL
MSDNDTVRLGLDFQRMLRINHMLYIAARDHVFAISLSASSEQIVPQQKLTWKTKDVDKCT
VRGKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQDGEEVVGQARCPFE
SRQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIE
YGNYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPG
DSFFYFDVLQSLTNVLQINHRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFNGKFKEQR
NSESTWTPVPEEQVPKPRPGCCAGDGSAAAYKSSTTFPDDTLTFIKNHPLMDEAVPSVNH
RPYFTRTTSRFKLTQLAVDTSAGPYKNHTVLFLGSEDGRVLKILASTHLNASFSTQLLED
IDVYNPTKCNVRGEDRRVLGLELDREHHTLFVAFSSCVIRVPLSRCNDYGSCKESCLSSR
DPYCVWQRMGSCAMVVPGFRGGFEQDVENGYPHYPDSCHDVLATTRKQSTLADSAYGKTT
PTTTASTTNQVAPFPKVAGDSERGTGPDGGPPVSVGDQGSPDSEPISVEMEGVRRPPEME
KTNHSVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGNKTKRLAKDPEAPIPHALSLRS
LAKLNGLLDSQNKEDKMEVSSPKLYNSFFQNGKEHHQGAPRRTGGHHPGMTMGDLVHPHH
LHHSSELSGLPTPDSTPELPIKNMKAFKNQWEKNQNCNNAKEPKSHNMGQGSRSSSGQLH
QQIYPYSHSFSNGQALANGHALVGGPQHLEERKIHNTERMLVQQPYPCYPQKVMEVTSLD
ELLKHIHEANSSKNTQVMTSSGLSASGGCHGGQLAFANRVQPHIPETESAPYYSSSTLPR
DSLTRRMDVPPDMPPHHQSTLERRHSSQRHSLITAATKIANGGGGGGMVHRQQSFSQRNG
HQHQPPPMLARMNSTGSACEIHYPLIPNGYLTRQQSYNGEQQEDTGGYLHRGAIVRRTTS
LKPDVPPKPLFIPASSPVNQQGNFNY
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtgcccgggtcgcctcggcccctcccccttctggaggtgggcctggctcta
gccctcacagccctcttacctcacctggccatgggagtcacacccttcccccaggacctg
gagccaatcagcattgtggggagagaacactcatacctgtacccaagcttccatggcctc
atgtcggacaacgatacagtacgactgggcctggatttccagaggatgctccggatcaac
cacatgctctacatcgcagccagggatcatgtgtttgctatcagtctcagcgcctcctct
gagcagatcgtcccacaacagaaattgacttggaagacaaaagatgtggataaatgcaca
gtgagggggaagaacagcgatgagtgctacaactacatcaaagttctggtcccacgcaac
gacgagacgctatttgcctgcggtaccaacgcctttaaccccacctgccgcaactacaag
atgtccacactggaacaggatggtgaggaggtcgtgggtcaggcccgctgtccctttgag
tctcgccaatccaacgtcggcctcttcgctggtggtgatttctactcggccaccatgaca
gacttcctggcgagtgatgcagtaatttaccgtagtctgggagagagcagcccggtgctt
cgtaccgtgaagtacgactccaaatggctacgagagcctcatttcctccatgccattgag
tacgggaactacgtgtacttcttcttcagtgagattgctgtggagtacaccacacttggc
aaggttgtgttctccagagtggctcgtgtatgtaagaacgacaacggaggttctcccagg
gttctagagcgttactggacgtcattccttaaagcgcggctcaactgctcggtgccgggc
gattccttcttctactttgacgttctgcagtcgctgaccaacgtgctgcagatcaatcac
agaccagccgtgctgggggtcttcactacacaggccaacagtatcacaggctcggcagta
tgtgcattctacatggatgacattgagaaggccttcaatgggaagttcaaggagcagagg
aacagtgagtcaacctggacgcccgtgcctgaggagcaggtacccaaacccagaccaggc
tgctgtgccggcgacggctctgccgctgcctacaagtcgtccacgaccttccccgacgac
accctgaccttcatcaagaaccaccccctgatggatgaggcggttccctccgtcaaccac
cggccctacttcacacgcacaaccagcaggttcaagttgacccagctagcagtggatacg
tctgctgggccctataagaaccacacggtgctgttcctggggagcgaggacggcagggta
ctaaagatcctggccagcacccatctcaacgcctccttcagcacacagctactggaggac
atcgatgtctacaaccccaccaaatgtaacgtccgcggagaggacagacgggttctggga
ttggagctggacagggaacatcacaccctgtttgtggccttctccagctgtgtgatccga
gtacctctgagccgctgcaacgactacggctcctgcaaggagagctgtctgtcctcgagg
gacccttactgcgtgtggcagaggatggggagctgtgctatggtggtgcccggattcagg
ggcggatttgagcaggatgtggagaacggctaccctcactacccagacagctgccacgac
gtcctggcgaccacacgcaagcaaagcactcttgctgattcagcatatgggaagaccaca
cccacaacaaccgccagcacaaccaatcaggtggccccattcccaaaggtggcaggtgac
tctgaaagaggtacaggtccagatggcggtcctccagtctcagttggggaccaggggtca
cctgactcggaaccaatcagtgtggagatggagggtgtccgacggcctcccgagatggag
aagaccaaccacagtgtccactacaccctgctgattgcctgtgtgctggtggcctttgtc
cttggagccttcctctcaggctttctggtctcctgctactgcaaccacaccggcaacaag
actaagaggctggccaaggacccggaggccccgatccctcacgccctgtcccttcgcagc
ctggccaagctcaatggcctgctggacagccagaacaaggaggataagatggaggtgtcc
tcgcccaagctctacaactccttcttccagaacgggaaggagcatcatcaaggagcaccc
agacggaccggtggtcaccacccagggatgaccatgggagatctggtccacccccatcac
ctacaccactcttcggagctctctggtctgcccaccccagattccacccctgaactgcct
atcaagaacatgaaggctttcaagaaccagtgggagaagaaccagaactgcaacaatgcc
aaggagcccaagtcccacaacatgggacaaggctccaggtccagctcaggccagctccac
cagcagatctacccctactctcacagcttctccaatgggcaagctctggccaatgggcat
gccttagttggtggaccccagcacctagaggaacgcaagatccacaataccgagcgcatg
ttggtccagcagccttacccctgctacccgcagaaggtgatggaggtcacatcgctggac
gagctgctcaaacacatccacgaggccaactccagcaaaaacacccaggtcatgacttca
tccggcctgtcagccagcggcgggtgccatgggggtcaactagcttttgccaaccgcgtc
cagccgcacatcccagagaccgagtcggcgccttactacagctcgtccaccctgccccga
gacagcctgacccgccgcatggacgtacctccggacatgccccctcaccaccagtccacc
ctggagcggaggcactcttcacagagacactcgctgattaccgctgccactaagattgcc
aacggagggggtggtggagggatggtccaccgacagcaaagcttcagccagcgtaacggc
caccagcaccaaccgccccctatgctggctcgaatgaactccaccggcagcgcctgcgag
atccactacccgctcatccccaacgggtacctgacgcgccagcagagctacaatggagag
caacaggaggataccggaggatacctccaccggggggccatagtccgccggaccacctcc
ctcaaacccgacgtccctcccaaacccctcttcatccccgcctcctctcccgtcaaccaa
cagggaaacttcaactactga
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