Salvelinus namaycush (lake trout): 120031514
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Entry
120031514 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120031514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120031514
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120031514
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120031514
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
120031514
NCBI-ProteinID:
XP_038833222
UniProt:
A0A8U0PXY2
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All DBs
Position
Sna37:32111955..32113591
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AA seq
420 aa
AA seq
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MADVPVLPSSLRTEGILLREIHVNLLECKVCFEKYNPRQKERRPQNLSCGHVLCLECVRA
LSHPVLKKLECPFCRQLCDVDSTSHCQALTDLQDLLLSRSPRSPVPHRVRGGSGWVGGLG
SGALRLRSAFGGWGSLINPTGVAVFGSSGTMVVVHDGERRVVVFGPQGRRLHGFGRRGRG
HGEVCHPVDVAVTPSGYVVVTDAGDGAVKVFTTRGSYVLAVWDSFQMPWGVDVDSCGHIL
VTDIQAGTLSQVVVDFARGVTLMNRAVITDLQRPKAVACCRVTGNIALVETLGLTTTQPP
NGPRPTRLTIFNKDFNMLSQIDSFTLSLGASVWPCMSAVAFDRDGDVIVIDSQRGLIWSL
GKLQNGPVLTPLVSEDLVRPVGLVATAQNTLIVLDSGDHAVKMYSVHSDAILVRKGCRKS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttcctgttcttccttcctcactgagaacagaggggatcctcctgagagag
atccacgtcaacctgctggagtgtaaagtctgcttcgagaagtataacccacggcagaag
gaacgccggcctcagaacctgtcctgcggccatgtactctgtctggaatgtgtccgggcg
ctctcccaccccgtcctcaagaagcttgagtgccctttctgccggcagctgtgtgacgtt
gacagcacctcccactgccaggcgctgacagacctccaggatcttctgctctcccgctcc
cccaggtcacctgtccctcatcgggtcagaggaggcagcggctgggtcggaggtctgggc
tctggagctctgcggcttcgctcagccttcggtggctgggggtccctgatcaaccccaca
ggggtggccgtgttcgggtcctctgggaccatggtggtggtgcacgatggagaaaggagg
gtggtggtattcgggcctcagggcaggcggctgcacgggttcgggcggaggggtcgcggc
cacggggaggtgtgtcacccggtggatgtggcggtgactcccagtgggtatgtggttgtg
acggatgccggtgacggtgcagtgaaagtgttcaccaccagggggagttatgttctggcg
gtgtgggactccttccagatgccctggggggtggacgtggacagctgtggacatatcctg
gtcactgacatccaggccggcacgctctcccaggttgtggtggactttgcccgtggcgtg
actctgatgaaccgagcggtcataaccgacctccagcggcccaaggcagtggcctgctgt
cgggtgacggggaacatcgccctggtggagacactggggctcaccaccacacaacctcca
aatggcccccggcctaccagactgacaatattcaacaaagactttaacatgctctctcag
atagacagctttactctgagcctgggggcctcagtgtggccctgtatgtctgccgtggcc
tttgacagggacggggatgtgatcgtgatagactcccagcgtgggttgatttggagtttg
ggaaagctccagaacggcccggtcctaacccccctggtcagtgaagacttggttcgcccg
gtggggctggtcgccacagcgcagaacacgctgattgttttagacagtggagaccatgca
gtgaagatgtattcagttcactcggatgctattctagtccgaaaaggatgtaggaagagt
tag
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