KEGG   Salvelinus namaycush (lake trout): 120031537
Entry
120031537         CDS       T07522                                 
Name
(RefSeq) endoribonuclease ZC3H12A-like
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120031537
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     120031537
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 zf-CCCH_2 zf-CCCH zf-CCCH_4
Other DBs
NCBI-GeneID: 120031537
NCBI-ProteinID: XP_038833265
UniProt: A0A8U0PY53
LinkDB
Position
Sna37:complement(6733645..6747851)
AA seq 667 aa
MDQAFPSLQTPVTGPFEPNPGELQLRVDFFRKLGYSPMEVRAALLKLGLSTDTNSVLGEL
VRSEASTSTSNSTIPESGDNTTGPTSHTGSSMASSRTHGPQRDRPVPSLEDRKDTDSGLK
PIVIDGSNVAMSHGNKQVFSCRGIELAVIYFLDRGHSTVIVFVPSWRKEQPRPDVPITDQ
HILMELEKKKIVVFTPSRRVGGKRVVCYDDRFIVKHAYESDGVIVSNDTYRDLQGERPEW
KRCIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKKPLLPEHKRQLCPYGKKCTYGV
KCKFYHPERTHQSHSSLADELREKARLSSAKEDRNPMMSQLRGHQSDPGSFPSYSLENDL
EHRLTLEPRGSLREGPKSQVTENMLLYWDGLRSSRNQQARSPTAVGQGQMDWPSMLSPST
TTDLPYASISHECLDSGFGSYESQSQYSDVSQGHSKAFRSRQQQQQGFPSGSRHPGMHPE
SLAQDSPQPCRCFHLAPSSGPQQQHHSNPHLESHSQSQPRYDTYSPPLFPPNMHHYSLPC
NFQQDGVGAHHFHPHQHPQKYWSDPFHGGVPQARASCSLPPGPHLHQPPTPHGAPHSSYR
DQQEHDSWAQPPPPSAFDTEREELRKKLQAIFNPHQVDTVMGMFPHLMDAQKLAAEILNL
KSQRGAF
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggaccaggcctttcccagcctccagaccccagtcactggtccgtttgaacccaaccca
ggagagctccagctcagggtggacttcttcagaaagttgggctactcccccatggaggtt
cgggccgccctgcttaagctaggcctgagtacagacaccaactctgtactgggggagctg
gtccgcagtgaagccagcactagtacttctaactcaaccatccctgagagtggtgacaat
actactggccccacaagccacacaggctccagcatggcctcctctaggacccatggcccc
cagagagacagaccagtcccatcactggaagacaggaaggacacagacagtggactgaaa
cctatcgttattgacggcagcaatgtggccatgagtcatggtaacaaacaagtgttctcc
tgtaggggaattgagttggcagtgatctatttcctggatagaggtcactcaaccgtcatt
gtgtttgtgccctcatggcgcaaggagcagcccaggcctgatgtccccatcacagaccaa
cacattctaatggagctggagaagaagaagatcgttgtcttcactccctcgagacgcgtc
ggtggtaaacgggtggtctgctacgacgaccgttttattgtgaagcatgcctacgagtcg
gacggcgtgatcgtgtccaacgacacctatagggacctgcagggagagcgtccggagtgg
aagcgctgtatcgaggagaggctgcttatgtactctttcgtcaatgacaaattcatgccc
ccagatgacccgcttggccgtcatggtcccagtctggagaacttccttaggaagaagcct
ctactaccagaacacaagcgccaactctgtccttatggtaaaaaatgcacctacggtgta
aagtgtaagttctaccaccctgagcgcactcaccaatcccactcctcgttggctgacgag
ctaagggagaaggcaaggctctcctcggcaaaagaggaccggaatcccatgatgtcacag
ctgaggggccaccagtccgacccgggatcctttccctcctattctctggagaatgacctg
gagcacaggctgacgttagagccccgcggttccctgagggagggtcccaagagccaggta
actgagaacatgttgctatactgggatgggttgcgctccagtaggaaccagcaggcccgc
agccccacagcagtaggccaaggacagatggactggcccagtatgctctccccatccact
actactgacctcccctatgccagcatctcccatgagtgcctggactctggttttggctcc
tatgagagccagagccagtactcggatgtgtcccaaggccacagcaaggccttcaggtcc
aggcagcagcaacagcagggcttcccctctggttccagacatccaggcatgcatccagag
agtctggcccaggacagcccccagccctgcaggtgtttccatttggctccctcctcgggt
ccccagcagcagcaccacagcaacccacacctcgagtcccactcccaatcccagccgagg
tatgacacctactcgcctcctctgttcccacccaacatgcaccactacagcctcccctgc
aacttccagcaagatggggtgggggcacaccatttccacccccatcagcacccccagaag
tactggtcagaccccttccatggcggggtcccccaggctagggcgtcctgtagcctcccc
cccggcccccacctccatcagccccctaccccgcatggagccccccactcatcttacagg
gatcagcaggaacacgactcctgggcccagccacctccaccttctgcctttgacacagag
agagaggagctccgtaagaaactgcaggccatcttcaacccccaccaggtggatacggtc
atgggaatgttccctcacctgatggatgcccagaagctggctgcagagatcctcaacctc
aaatctcagagaggtgccttctga

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