Salvelinus namaycush (lake trout): 120031587
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Entry
120031587 CDS
T07522
Name
(RefSeq) glutamate receptor ionotropic, kainate 3-like
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120031587
04082 Neuroactive ligand signaling
120031587
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120031587
Ion channels [BR:
snh04040
]
Ligand-gated channels
Glutamate (ionotropic)
120031587
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Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
120031587
NCBI-ProteinID:
XP_038833324
UniProt:
A0A8U0TZF0
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Position
Sna37:6971707..7115047
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AA seq
919 aa
AA seq
DB search
MRNTWLSARSSILEYWTSAILCLFWIQYSCGMPHVIRIGGIFEQTEGPVPLVSPEELAFK
FAVNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAV
QSICNALEVPHIQVRWKHHPMDNRDTFYANLYPDYSSLSYGILDLVQFLKWKTATVVYDD
STGLIRLQELIMAPSRYNIRLKIRQLPLDGEDTRPLLKEMKRGREFRIIFDCSHEMAAQI
LKQAQTMGMMTEYYHYIFTTLDLMAIDLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSQ
ERQIPPKPDSGLLEGIMTTDAALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGRF
MNFIKESHWEGLTGRLSFNRTSGLRTDFDLDIISLKEEGLEKVGKWSSSGGLNITEVPKR
KGLNITDSLANRSLVITTILEEPYVMLKKSDKALVGNDRFEGFCIDLLKELASILGFTYE
IRLVPDGKYGSQDDKGQWNGMIKELMEHRADLAVAPLTITYLREKVVDFSKPFMSMGISI
LYRKPNTTNNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSE
VVENNFTLLNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLT
VERMESPVDSADDIAKQTKIEYGVVKDGATMSFFKKSKVSTFEKMWAFMSSKQSTSLVKS
IEDGIQRVLKSDYALLMESTTIDYITQRNCNLTQVGGVIDSKGYGIGTPMGSPYRDKVTI
AILSILEDGRLHMLKEKWWSGSSCLDEERREKAGPMGIQNLGGIFIVLASGLVLSVFVAI
AEFIYKLRKTAKREQRSFCSAMVDEIRQSFTCGTRVKHKPHHQVPVKTDAVINMHTFNDR
RLPGKDNLSCNTGMTPVFP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacacttggttgtctgcccggagttcgattttggaatactggacatcggccatt
ctatgtctcttttggattcagtactcttgtgggatgcctcatgtcattcgaatagggggg
attttcgaacaaacagagggaccggtgccgctcgtcagcccagaggagcttgcctttaaa
tttgcagtgaacaacatcaacagaaacaggactttattgcccaacacgacgttaacgtac
gacatacagaggattaatatctacgacagttttgaagcgtcgagaaaagcctgtgaccaa
ctgtctttaggtgtagtggcaatatttgggccgtcacatagctcgtcctcaaacgccgtc
cagtccatctgcaatgcgttggaagtgccacacatccaggtgcgatggaaacatcacccg
atggacaacagggacacattttacgccaacctgtacccagattactcttctctcagctac
ggcatcttggatttggtgcagttcctgaagtggaaaacagccacagtcgtatacgatgac
agtacaggtcttattagactacaggaactgataatggccccctccaggtataacatcagg
ctaaagattcgccagctccctcttgacggtgaggacaccaggcctctcctcaaagagatg
aagagaggacgggagtttcgcattattttcgactgcagccacgaaatggctgcacagatc
cttaaacaggcccagacaatgggaatgatgacagagtactaccactacatcttcaccact
ctggacctcatggctatcgacctggagccctaccgtttctgtggcgtcaacatgaccggc
ttccgcatcctcaacgtggacaaccctcaggtggcgtccatcgttgagaagtggtcccaa
gagaggcagatacctcccaagcccgactcgggtctcctggaggggatcatgacgacagat
gctgctctgacgtacgacgcggtccacatcgtgtccgtctcctaccagcacgcaccacag
atgacggtcaactcgctgcagtgccaccgccacaagccatggaggttcggcggacgcttt
atgaacttcatcaaggagtctcactgggaaggcctgacggggaggctgtcgttcaacagg
accagtggcctccgcacagactttgacctggacatcatcagcctgaaagaggagggcctg
gagaaggtggggaagtggagttcgtccggaggtctcaacatcactgaggtccccaagcgg
aaagggttgaacatcacagactcgctggccaaccgttccctggtcatcaccaccatcctg
gaggaaccatatgtcatgcttaagaagtctgacaaggcgctggttggcaatgaccgtttc
gagggattctgtatcgacctgctcaaggagctggccagcatcctgggcttcacctacgag
atccgcctggtgcctgatgggaagtacggatcgcaggacgacaagggccagtggaacggc
atgatcaaggagctgatggaacacagagccgacttggctgtggcccctcttaccattacc
tacctgcgtgagaaggtcgtggacttctccaagcccttcatgagcatgggcatcagcatc
ctgtaccgcaagcccaacaccaccaacaacggcttcttctccttcctcaaccccatgacc
ccggacatctgggtctacatcctgctggcctacctaggcgtcagctgtgttctcttcgtc
atcgccaggttcagtccgtacgaatggtacgacgcccatccctgcaatcccggatccgag
gtggtggagaacaacttcaccctccttaacagcttctggttcggtgtgggctccctcatg
cagcaaggctctgagctgatgcccaaagccctgtccaccaggatcatcggaggcatctgg
tggttcttcaccctcatcatcatctcctcctacacggccaacctggccgccttcctcacc
gtggagcgcatggagtcgcccgtggactctgccgacgacatcgccaagcagacaaagatt
gagtatggcgtggtcaaagacggtgccaccatgtctttcttcaagaaatcaaaggtttct
acttttgagaagatgtgggcctttatgagtagtaaacagagtacgtcgctggtcaagtcc
attgaggacggcatccagagggttctgaagtctgactatgccttgctcatggagtccacc
acaatcgattacattacccagcggaactgcaacctcacccaggttggaggcgtcattgac
agcaaaggctatggaataggcactcccatgggctctccataccgggacaaagtgaccatc
gccatcctgagcatcctggaagatggccgtctgcacatgctcaaggagaagtggtggagc
ggcagcagctgtctggacgaagagcgccgtgagaaagccggccccatgggcattcagaac
ctgggagggatctttatagtgctggcgtctggcctggttctctccgtctttgtggctata
gccgaattcatatacaagctaaggaagacggcgaaacgtgagcagaggtctttctgcagt
gccatggtggacgagatcagacagtcgttcacctgcgggacgcgtgtgaaacacaagccc
caccaccaggtcccggtcaagacggatgcagtgatcaacatgcacacgttcaacgaccga
cgactcccgggaaaggacaacttgagctgcaacactgggatgacccccgtgttcccgtga
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