Salvelinus namaycush (lake trout): 120031663
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Entry
120031663 CDS
T07522
Symbol
atxn1b
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120031663 (atxn1b)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
120031663
NCBI-ProteinID:
XP_038833387
UniProt:
A0A8U0U8G9
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Position
Sna37:complement(17133946..17139525)
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AA seq
930 aa
AA seq
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MKSNQERSHGCLPPKKREILALEQRPVVVTAAAEILALEQRPMVVPAAAAASADTILHTE
NLAWLANVASERCRSTETPSPRFHVSSSSSSSPSPSATSLSTIPLSSLSTVYPTGVGLSQ
QGGTIQYPQLAPNLQFISSGPYTGYISSQIVQSTATSVATSTGQQRHHLDGHCYTAALIS
QATKAGEQQNQLQIGLPSDLAVSVGGTIVSLPTSTHFPSTHQYIQLDSSSPLTVTSPTQG
HLQPLQLHTHPGMGLLPHTLTLAPSQVLVQYADGLGVNKAEGGHTKVVQLNGELERSFGK
QSCAGVKGISYSNQNNQQVHHGYEARHILIPADYTTQDSTGLQTSLVLVANAQPHPHPHP
TSGAEQDKVQVHPSLIHSEGGGICLGKPVSRTSSFTSLNSSDALKVSSAPHTVIRTTHHS
DQHVQSLYSTTQAPIIGYIARAGNQHGVSYATLPQHLVIPDGQSLQSLLIPVNGVGDVTT
TTDLEAACSVTARTASTTASQLAPATTSLPRHTYLTASLSKCEMLGSDSHHQAPAVLQAQ
VLPIQHIQIPSNTTATVVASPSPALALAPAPVQASPSLSSSLSSSPALAPAPVQATPSPS
SSPTTLPPFFMRGSIIQLADGELKRVEDLKTEDFIQSAEISSELKIDSSTVERIDTGQTP
NAVIIQFGVGEHKAQVCVEVLLEYPFFVFGQGWSSCCPDRTTQLLELSCAKLCVGDVCVS
LTLRSLRGGDGSVSGRNHSSQGHEVKLRHSHNTGDITQESNRQGNSQGNSQSNGSNSVFL
VQVAKTDRLNKEDRGVPRSVDQVTGSGLRPGSGSGPGVYGAGVGPRSTSDLQAVSGNGEM
RDRENVEVIGRNNGEMREREQNSHMPPSPLKTEVGEADKEKPCGRKRRWSAPERDQTERA
DEEPPLTLPKPSFITQQVKLSMEGRSNVSR
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaggagaggagccatggctgtctacctccaaagaagcgtgagatccta
gccctggagcagaggcctgtggtggtaacagcagcagctgagatcctggctctggagcag
aggcctatggtggtaccagcagcagctgcagcctcagcagacactatcctacacacagag
aacctggcttggctggccaatgtagccagcgaacgctgcagatccacagaaactcccagc
cccaggtttcatgtctcctcgtcctcctcttcgtccccctccccttctgctacctctctg
tctacgatccccctgtcctctctctccactgtctaccccactggggtggggctcagccaa
cagggcgggacaatccagtacccccagctggcccctaacctccagttcattagctcgggg
ccgtacactggctacatctcctctcagatcgtccagtccactgccaccagtgtagccacc
tccacagggcaacagcgccaccatctggacggccactgctacaccgccgccctcatctcc
caggccaccaaggctggtgaacagcagaaccagctccagataggactgccgtctgacctg
gctgtgtccgttggagggactatcgtctccctgccgacctccacccacttccccagtacc
caccagtacatccagctggacagcagcagccctctgaccgtcacctcccctacccagggc
cacctccagcctctccagctccacacccaccctgggatgggcctcctcccccacaccctc
accctcgccccctcccaggtgctggtccagtatgcggatgggttaggggtcaacaaagct
gagggcggacacaccaaggtggtgcagctaaatggagagctggagaggagtttcggtaaa
cagagctgtgctggcgtcaaaggaatctcctactctaaccagaacaatcagcaggttcac
catggatatgaagctcgacacatcctcattcccgcagactacactacccaggattcaaca
ggactacaaacctccctggtgctggtagcaaacgcccagccccacccccacccccaccct
accagtggtgctgagcaggacaaggtccaggtccacccatcactaatacacagtgaggga
ggaggcatctgtctagggaaacctgtctccagaacctcctctttcacctccctcaactcc
tctgatgctctgaaggtctcttctgcccctcacacggttatccggaccacccaccactct
gaccagcatgtacaaagcctgtactccaccacccaggcaccaatcatcggctacatcgcc
agggcaggtaaccagcatggcgtcagctacgccaccctgccgcagcacctggtcatcccg
gacggccagtccctccagtctctcctgatacccgttaacggagtcggtgacgttaccacc
actacggacctcgaggctgcctgctcggtgaccgccaggacggccagcaccaccgcctct
cagctggctccagcgaccacatccctcccccgccacacctacctcaccgcgtccctgtcc
aagtgtgagatgctggggtcggacagccaccaccaggcccctgctgtactccaggcccaa
gtactacccatccaacacatccaaatcccgtctaacacaactgctactgtggtggcgtcc
ccctcccctgccctagccctagctcccgcccctgtccaggcctccccctctctctcctct
tccctctcctcctctccagccctagctccagcccctgtccaggccaccccctctccctcc
tcctctccaaccacgctccctccgttcttcatgcgtggctccatcatccagctggcggat
ggggagctgaagcgagtggaagacctgaagacggaggactttatccagagtgctgagatc
agcagtgagctgaagattgactccagcactgtggaacgcatcgacacaggccagacaccc
aacgctgtcatcatacagttcggtgtcggggaacacaaagcacaggtgtgcgtggaggtg
ctgttggagtacccgttctttgtgttcggccagggctggtcgtcctgctgccctgaccgg
accactcagctgttggagctgagctgtgccaagctgtgtgttggggacgtgtgtgtctcc
ctgaccctcaggagcctgaggggtggcgacggctctgtgtctgggaggaaccacagcagc
cagggtcacgaggtcaagctgaggcacagccacaacactggggacatcacacaggagtct
aaccggcaagggaacagtcaggggaatagccagagtaatggcagcaacagtgtcttcctg
gtgcaggtggccaaaacagacaggctgaataaggaggacaggggcgtcccccgctctgtg
gaccaggtgacaggatctggactgagaccaggatctggatctggaccaggggtctacgga
gctggagttggacccaggagcacctcggacctgcaggctgtctcagggaatggagagatg
agagacagagaaaatgtagaggtgataggaagaaacaatggagagatgagagagagagaa
cagaatagccacatgcccccttcgcccctcaagacagaagtgggtgaggcagacaaagaa
aaaccctgcggtcgtaagaggaggtggtctgctccagagagagatcagacagagagggcg
gacgaggaaccccctttgactctgccaaaaccctcttttataactcagcaggtcaaactc
tccatggagggaaggtcaaatgttagtcgttga
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