KEGG   Salvelinus namaycush (lake trout): 120031709
Entry
120031709         CDS       T07522                                 
Symbol
jarid2a
Name
(RefSeq) protein Jumonji isoform X1
  KO
K11478  protein Jumonji
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    120031709 (jarid2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:snh03036]
    120031709 (jarid2a)
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120031709 (jarid2a)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     120031709 (jarid2a)
SSDB
Motif
Pfam: JmjC ARID JmjN
Other DBs
NCBI-GeneID: 120031709
NCBI-ProteinID: XP_038833437
UniProt: A0A8U0PZY9
LinkDB
Position
Sna37:16938136..17034597
AA seq 1166 aa
MSKDRPKRNIIQKKYDDSDGIPWLEEREVRKVLYLSLKEFKNTQRNKVTDGLGTGNVNGS
FPHSHGCRSGPKAGIPAVNGKAECSRCSSQSNDGSSEYSGDDPVRKRPRLQAQRKFAQSQ
PSSPSATPVKLSETLLPPSPTSPPSDLTRRKPKTEDFITFLCLRGSAALPGNMAYFGSAQ
DDVDLEDEDDEEEECDDRMSAHSHNSTSCLSSQRKNKTTPGKKVSNGHVLNGHCRSLRGK
ELFLRPRGREAIQARERAERGEARRENHRTSTGPPARTSSTTHSLRHSRPTQEHPKQVSK
GNRLSRVLSATVHNSGAKKPPASRPPPSRTVKSTAAALPRGHTPYTKARLLKEAKLTLGK
RASSKARQPLKKQRRSASGSARRHPRPPHSNSGKLSSGNAKTPNKQKVQSNKAAGRCCLQ
RVNGQLHPRRCGGKQVLQGREGVRHSKRRLGLPAEESSPEVKKVRLQVNAPETRSSRKVN
VQEKAVTESGGHLGKVTSSRPSSSEQRPKRASAGKLMLTRQAQSIPPTANTTTTANTTPP
AKNTTSKKTFQGTSKNTSHVTSKGTSTSTSTTSAAKVKPGTSSPAKAAAEAKAAAEAKAA
AEAKAAAEPKAAERQRGEREERESGEKRGAAPPPPLSLTEVPVFRPSLEEFHDPLVYVEA
VRGQAESYGLCRVAPPQDWRPECKLKEDMRFVTQVQHIHKLGRRWGPNVLRLACIRKHLQ
AQGISMEDPPLIGGCELDLARFFQLINDMGGMQQVSDMKKWNKLADQLRIPKTAQDRLAK
LQEAYCQYLLSYDSLDPAERIRLEREVLEEKGRLEKKRGPLEGHSDDSQQSLLQLPRCEP
KNGLVNGVIRRNGLPRNLEEGAKEGKEQEKDMWLRSSRRRLFSQEKKGGRGGSEEEKEFL
SDQHKCIYRGKSVSLTTFYRTARNTMNMCFNKEPGTAEVEQEYWNIVEQRDCHVAVHCGK
VDTKTHGSGFPVGKSETFSKHGWNLTVLPNNSGSILRHLGAVPGVTIPWLNIGMVFSTSC
WSRDHHRLPYIDYLHTGADCIWYCIPAEEKVKLDKVVHTLLQANGTPGLEMLENNIMISP
EVLCRAGVKVHRTVQQSGQFVVCFPAAFVSKVCCGYSVSETVHFATPQWLNTGYQAAKGS
DHIEYELLYLSCTSPCSCTSWGVQFD
NT seq 3501 nt   +upstreamnt  +downstreamnt
atgagtaaagacagacccaaaaggaacatcatacagaagaaatacgacgacagcgatggt
atcccgtggttagaggagcgcgaggtgaggaaggtgctctacctttctctgaaggagttt
aagaacacccagaggaacaaggtgacagatggcctcggcacaggaaacgtcaacggctct
ttcccacacagccatggctgccggtcaggaccaaaggcagggataccggcagtcaacggt
aaagctgagtgctcacgctgctcgtctcaaagcaacgatggcagcagcgagtattcaggg
gacgatccagtcagaaagagaccacggctgcaggctcagaggaagtttgcccagtctcag
cccagctcccccagtgccacgccggtcaagctgtctgagaccctcttgccccctagcccc
acctctccccccagcgacctcaccagacgcaagcccaagactgaggacttcatcaccttc
ctctgtttacgaggctcggctgcgttgccaggcaacatggcgtactttgggagtgcccag
gatgatgtggatctggaggatgaagatgatgaagaggaggagtgtgacgacaggatgtca
gctcacagccacaactcaacttcctgtctgtcctcacagcggaaaaacaaaacaacgccg
gggaagaaggtctccaatggacatgtgttgaatggccactgcaggtccttacgggggaag
gagctcttcctgaggcccagagggagagaggctatccaggccagagagagggctgagagg
ggagaggcccggagggagaaccacaggacctctacaggacccccagccaggacctccagc
accacccacagtcttcgccacagcagacccacccaggagcacccaaagcaggtttcaaaa
gggaacaggctgtcacgggtattgtcagctaccgtacacaactccggtgccaaaaagccc
ccggcttcccgaccaccgccgtctagaactgtgaagtccacagccgcagcgcttcccagg
ggccacaccccctacaccaaagccagacttctcaaagaggccaaactcaccttgggcaaa
agagcctcctccaaagctcgccaacccctgaagaagcaacggcgctctgccagtggcagt
gcccgccgccacccacgcccaccacactccaactcaggaaaactctcaagcggcaatgca
aagactcccaacaaacagaaggtacaatccaacaaggcagctggcaggtgttgcctacaa
cgagtcaacgggcagcttcacccacgccgatgtggcggtaagcaggtactgcaggggcgt
gagggcgtcagacactccaagagacgtctggggctcccggctgaggagtcttcgccggag
gtcaaaaaggttagactgcaggtcaatgccccggagacgcgaagcagcaggaaggtcaat
gtccaggagaaggctgtgacggagtccggtggccatcttggtaaggtcacgtcctcccga
ccttcctcctcggagcaaagacccaaacgagcctccgctggcaagctgatgttgacccga
caagcacagtccataccccctactgctaatactactactactgctaatactacaccacca
gctaagaacactacttctaagaaaactttccagggcacttccaagaacacttcccatgtc
acttccaagggcacttccacctccacttccactacctcagcagccaaggtgaaaccaggc
accagcagcccggctaaagcagcagcagaggctaaagcagcagcagaggctaaagcagca
gcagaggctaaagcagcagcagagcctaaagcagcagagaggcagcggggagagcgggaa
gagcgggagagtggggagaagagaggtgcagcaccacccccgcccctgtccctaaccgag
gtgccagtgttcagacccagcctggaggagttccacgaccccctggtgtatgtggaagcg
gtgcgggggcaggcagagagctatgggctgtgcagggtggctcctcctcaggactggagg
ccagagtgcaagctgaaagaggacatgaggtttgtgacccaggtgcagcacatccataag
ctgggtcggcgctgggggcccaatgtactccggctggcctgcatcaggaaacacctccag
gcccagggcatctccatggaggaccccccgctcataggcggatgtgagttggacctggcc
cggttctttcagctcatcaacgacatgggcggcatgcagcaggtcagcgacatgaagaaa
tggaacaagctagccgaccagctccgtatccccaagactgcacaggatcgtctggccaag
ctgcaggaggcctattgtcagtacctactgtcctacgactccctggaccccgctgagcgc
atccgcctggagagggaggtgctggaggagaaggggaggctggagaagaagagagggccc
ctggagggccactcagatgactcccaacaaagcctgctccagctgccccgctgtgagccc
aagaatggcctggtaaacggggtgatccggaggaacggcctgcccaggaacctggaggaa
ggagcgaaagaggggaaggaacaggagaaggacatgtggctgaggtccagcaggaggaga
ctgttctctcaggagaagaaaggaggaagaggaggatcagaggaggagaaagagtttctt
agcgaccagcacaagtgtatatacagggggaagtcggtttctctcactacgttctacagg
acagccaggaatactatgaacatgtgtttcaacaaggagcctgggacggctgaggtggag
caggagtactggaacatcgtggagcagagggattgtcatgttgcagtgcactgtgggaaa
gtggacactaaaactcatgggagtggcttcccagttggaaagtctgagacgttttcaaaa
catggatggaaccttacagtccttcccaataattcaggatccatcttacgccaccttggt
gctgtgccaggagtgaccattccttggctgaacatcggcatggtcttctctacctcatgc
tggtcgcgagaccatcatcgccttccatacattgattacttacacactggtgctgactgc
atttggtactgtattcctgctgaggagaaggtgaagctggacaaggtggttcacacacta
ctgcaggctaatggaaccccaggactggagatgttggagaacaacatcatgatctctccg
gaggtgctgtgtcgagcgggggtcaaagtgcaccggaccgtccagcagagtggccagttc
gtcgtctgtttcccggcagcgttcgtctccaaggtgtgctgcggctacagcgtctccgag
acagtgcacttcgccaccccccagtggctgaacacgggataccaggctgccaaggggtct
gaccacatagagtatgaactcctgtacctgtcctgtacctctccatgctcctgtacatct
tggggtgtccagtttgactga

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