Salvelinus namaycush (lake trout): 120031709
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Entry
120031709 CDS
T07522
Symbol
jarid2a
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120031709 (jarid2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120031709 (jarid2a)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
120031709 (jarid2a)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
120031709 (jarid2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
Motif
Other DBs
NCBI-GeneID:
120031709
NCBI-ProteinID:
XP_038833437
UniProt:
A0A8U0PZY9
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Position
Sna37:16938136..17034597
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AA seq
1166 aa
AA seq
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MSKDRPKRNIIQKKYDDSDGIPWLEEREVRKVLYLSLKEFKNTQRNKVTDGLGTGNVNGS
FPHSHGCRSGPKAGIPAVNGKAECSRCSSQSNDGSSEYSGDDPVRKRPRLQAQRKFAQSQ
PSSPSATPVKLSETLLPPSPTSPPSDLTRRKPKTEDFITFLCLRGSAALPGNMAYFGSAQ
DDVDLEDEDDEEEECDDRMSAHSHNSTSCLSSQRKNKTTPGKKVSNGHVLNGHCRSLRGK
ELFLRPRGREAIQARERAERGEARRENHRTSTGPPARTSSTTHSLRHSRPTQEHPKQVSK
GNRLSRVLSATVHNSGAKKPPASRPPPSRTVKSTAAALPRGHTPYTKARLLKEAKLTLGK
RASSKARQPLKKQRRSASGSARRHPRPPHSNSGKLSSGNAKTPNKQKVQSNKAAGRCCLQ
RVNGQLHPRRCGGKQVLQGREGVRHSKRRLGLPAEESSPEVKKVRLQVNAPETRSSRKVN
VQEKAVTESGGHLGKVTSSRPSSSEQRPKRASAGKLMLTRQAQSIPPTANTTTTANTTPP
AKNTTSKKTFQGTSKNTSHVTSKGTSTSTSTTSAAKVKPGTSSPAKAAAEAKAAAEAKAA
AEAKAAAEPKAAERQRGEREERESGEKRGAAPPPPLSLTEVPVFRPSLEEFHDPLVYVEA
VRGQAESYGLCRVAPPQDWRPECKLKEDMRFVTQVQHIHKLGRRWGPNVLRLACIRKHLQ
AQGISMEDPPLIGGCELDLARFFQLINDMGGMQQVSDMKKWNKLADQLRIPKTAQDRLAK
LQEAYCQYLLSYDSLDPAERIRLEREVLEEKGRLEKKRGPLEGHSDDSQQSLLQLPRCEP
KNGLVNGVIRRNGLPRNLEEGAKEGKEQEKDMWLRSSRRRLFSQEKKGGRGGSEEEKEFL
SDQHKCIYRGKSVSLTTFYRTARNTMNMCFNKEPGTAEVEQEYWNIVEQRDCHVAVHCGK
VDTKTHGSGFPVGKSETFSKHGWNLTVLPNNSGSILRHLGAVPGVTIPWLNIGMVFSTSC
WSRDHHRLPYIDYLHTGADCIWYCIPAEEKVKLDKVVHTLLQANGTPGLEMLENNIMISP
EVLCRAGVKVHRTVQQSGQFVVCFPAAFVSKVCCGYSVSETVHFATPQWLNTGYQAAKGS
DHIEYELLYLSCTSPCSCTSWGVQFD
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagacagacccaaaaggaacatcatacagaagaaatacgacgacagcgatggt
atcccgtggttagaggagcgcgaggtgaggaaggtgctctacctttctctgaaggagttt
aagaacacccagaggaacaaggtgacagatggcctcggcacaggaaacgtcaacggctct
ttcccacacagccatggctgccggtcaggaccaaaggcagggataccggcagtcaacggt
aaagctgagtgctcacgctgctcgtctcaaagcaacgatggcagcagcgagtattcaggg
gacgatccagtcagaaagagaccacggctgcaggctcagaggaagtttgcccagtctcag
cccagctcccccagtgccacgccggtcaagctgtctgagaccctcttgccccctagcccc
acctctccccccagcgacctcaccagacgcaagcccaagactgaggacttcatcaccttc
ctctgtttacgaggctcggctgcgttgccaggcaacatggcgtactttgggagtgcccag
gatgatgtggatctggaggatgaagatgatgaagaggaggagtgtgacgacaggatgtca
gctcacagccacaactcaacttcctgtctgtcctcacagcggaaaaacaaaacaacgccg
gggaagaaggtctccaatggacatgtgttgaatggccactgcaggtccttacgggggaag
gagctcttcctgaggcccagagggagagaggctatccaggccagagagagggctgagagg
ggagaggcccggagggagaaccacaggacctctacaggacccccagccaggacctccagc
accacccacagtcttcgccacagcagacccacccaggagcacccaaagcaggtttcaaaa
gggaacaggctgtcacgggtattgtcagctaccgtacacaactccggtgccaaaaagccc
ccggcttcccgaccaccgccgtctagaactgtgaagtccacagccgcagcgcttcccagg
ggccacaccccctacaccaaagccagacttctcaaagaggccaaactcaccttgggcaaa
agagcctcctccaaagctcgccaacccctgaagaagcaacggcgctctgccagtggcagt
gcccgccgccacccacgcccaccacactccaactcaggaaaactctcaagcggcaatgca
aagactcccaacaaacagaaggtacaatccaacaaggcagctggcaggtgttgcctacaa
cgagtcaacgggcagcttcacccacgccgatgtggcggtaagcaggtactgcaggggcgt
gagggcgtcagacactccaagagacgtctggggctcccggctgaggagtcttcgccggag
gtcaaaaaggttagactgcaggtcaatgccccggagacgcgaagcagcaggaaggtcaat
gtccaggagaaggctgtgacggagtccggtggccatcttggtaaggtcacgtcctcccga
ccttcctcctcggagcaaagacccaaacgagcctccgctggcaagctgatgttgacccga
caagcacagtccataccccctactgctaatactactactactgctaatactacaccacca
gctaagaacactacttctaagaaaactttccagggcacttccaagaacacttcccatgtc
acttccaagggcacttccacctccacttccactacctcagcagccaaggtgaaaccaggc
accagcagcccggctaaagcagcagcagaggctaaagcagcagcagaggctaaagcagca
gcagaggctaaagcagcagcagagcctaaagcagcagagaggcagcggggagagcgggaa
gagcgggagagtggggagaagagaggtgcagcaccacccccgcccctgtccctaaccgag
gtgccagtgttcagacccagcctggaggagttccacgaccccctggtgtatgtggaagcg
gtgcgggggcaggcagagagctatgggctgtgcagggtggctcctcctcaggactggagg
ccagagtgcaagctgaaagaggacatgaggtttgtgacccaggtgcagcacatccataag
ctgggtcggcgctgggggcccaatgtactccggctggcctgcatcaggaaacacctccag
gcccagggcatctccatggaggaccccccgctcataggcggatgtgagttggacctggcc
cggttctttcagctcatcaacgacatgggcggcatgcagcaggtcagcgacatgaagaaa
tggaacaagctagccgaccagctccgtatccccaagactgcacaggatcgtctggccaag
ctgcaggaggcctattgtcagtacctactgtcctacgactccctggaccccgctgagcgc
atccgcctggagagggaggtgctggaggagaaggggaggctggagaagaagagagggccc
ctggagggccactcagatgactcccaacaaagcctgctccagctgccccgctgtgagccc
aagaatggcctggtaaacggggtgatccggaggaacggcctgcccaggaacctggaggaa
ggagcgaaagaggggaaggaacaggagaaggacatgtggctgaggtccagcaggaggaga
ctgttctctcaggagaagaaaggaggaagaggaggatcagaggaggagaaagagtttctt
agcgaccagcacaagtgtatatacagggggaagtcggtttctctcactacgttctacagg
acagccaggaatactatgaacatgtgtttcaacaaggagcctgggacggctgaggtggag
caggagtactggaacatcgtggagcagagggattgtcatgttgcagtgcactgtgggaaa
gtggacactaaaactcatgggagtggcttcccagttggaaagtctgagacgttttcaaaa
catggatggaaccttacagtccttcccaataattcaggatccatcttacgccaccttggt
gctgtgccaggagtgaccattccttggctgaacatcggcatggtcttctctacctcatgc
tggtcgcgagaccatcatcgccttccatacattgattacttacacactggtgctgactgc
atttggtactgtattcctgctgaggagaaggtgaagctggacaaggtggttcacacacta
ctgcaggctaatggaaccccaggactggagatgttggagaacaacatcatgatctctccg
gaggtgctgtgtcgagcgggggtcaaagtgcaccggaccgtccagcagagtggccagttc
gtcgtctgtttcccggcagcgttcgtctccaaggtgtgctgcggctacagcgtctccgag
acagtgcacttcgccaccccccagtggctgaacacgggataccaggctgccaaggggtct
gaccacatagagtatgaactcctgtacctgtcctgtacctctccatgctcctgtacatct
tggggtgtccagtttgactga
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