Salvelinus namaycush (lake trout): 120031750
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Entry
120031750 CDS
T07522
Symbol
nipbla
Name
(RefSeq) nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120031750 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120031750 (nipbla)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
120031750 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
HEAT_EZ
Cnd1
Cnd3
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
120031750
NCBI-ProteinID:
XP_038833853
UniProt:
A0A8U0TZ80
LinkDB
All DBs
Position
Sna1:complement(6110261..6156136)
Genome browser
AA seq
2537 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVNCLLACRDEN
LVSQLAHGLNQVSTEHIELKDNLGSDEPEGDVPVLLQTVLSRNPGIFREKNVMQQPMVQQ
YKPIQNSMHGSPAQSANFQQASMSPNPSSRGFVSPQSSSGSRFIPQQNSPVPSPYTPQSP
AGFMQYPHPPSYNQHQQIQQASPMVPGGMRNIHENKGPMTNAAHHHPDRQEDYMSIVHRL
GNEESDPSMRNASFPLRSPQPGCSPVGNEGTPKAGSRPPLILQSPPPYMSPREGPPDLLL
ESPDQRKKQQKKKLVGKEDKDAYDIVTSPSKDTTKLTLSLSRVKSEEVEDHSGELLPVMM
DQNSDLEGELGYQQVPVLQNVGVIKGQEGPLSSPFDEAELDALAEIERIERESASERERC
SKEVQDKDKPLKKRKQDSFPLEPGAGGTAGTTGAPGSGGGGNAGKLIPQEATAAGNGASR
PALMVSIDLQQAGRADGQLDPCMAAPIPALEAQRWPEEPAEGPAAEGSDTAGVLRLKADD
RPEVIKNSMDKHDNHREPSRHRHDGKQDRRPDTPKSSSREHGRDRDRERRHRNEDRRSPE
ERYRPDSPRVKQEGRGGGFDPSGRPRSDRPGFRSPSGGETARNRPDGHKQLQPESKSGEF
PAYLLGGQGSGGLKNFVIPKMKRDGGAVDVAEGWGQPRVKLERLGVRGLVDHISKRPKPV
VVLQKLSFDEVQRIIRVKDRHGSKSGKNRLLSGKSGKGGLDQSVLEELPPELLAEMESTM
PLCERVKMNKRKRSTVKEKPKYTEVDSDDDSNGESARKRQRKNRGDKAWEYEPERERRGS
GEHRRSKGFQEGRRGSGSCYRDSSDEESPPPSMSDIARQMKKKEIQKKRKAYEPKLTHQE
LMDSSTFKRFSSSVDNILENLEDVDFTQMDDDEIPQELLLGKQQLNELGSESAKIKAMGI
TCRMPSDKLVKVLNILEKNIQDGARLSTLMSHDNDEDEEKLWRDLIMERVTKSADACLTA
LNIMTSAHMPKAVYMEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGLLSSKAKRAK
CSTHKQRVIVMLYNKVCDMVSNISELLEIQLLTDTTILQISSMGITPFFVESVSELQLCS
IKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDRDGEPMYIQMVTALV
LQLIQCVVHLPNDRDAMEDEYNSKVDQDLLITNNYETAMRTAQNFLSVFLKKCGSKQGSE
EDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMTLRVASLDYLGT
VAARLRKDAVTSKMDQRSIDRILKETQGDDETQQLQKALLDYMEENTETDPSLLFARKFY
IAQWFRDTTIETEKTMKSQKRDREEDSSDGPGHHAKDIETIGEVMQRAEARKKFLRKIIK
TVPSHFTTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKA
MKCLSEVVSVDPSILSRLDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDM
LIERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVRMIRRVNDEEGIKKLVNETFQK
LWFTPTPAHDKDTMTRKILNITDVVTACKDTGYDWFEQLLQNLLKVEEDAAYKPAQKACV
QLVDNLVEHILKYEESLTESKGVNSTRLVSCITTLFLFSKIRAQLIVKHAMTMQPYLTTK
CNNASDFMVICNVAKILELVIPLMEHPSETFLTTIEEDLMKLIIKYGMTVVQHCVSCLGA
VVNKVTHNYKFVWSCFNRYYGALTKLKTQHQEDPNSTALAANKPALLRSLFTVGALCRHF
EFDMEEFKGITKVVIKEKVLELLLYFTKHEDEEVKTKAIIGLGFLVIMYPSQMFSPEVKT
LYNGILADRSTSVNLKIQVLKNLQTYLQEEDSRMQEADQHWKKLSKQEDLKEMGDISSGM
SSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPSM
RNKADQQLVEIDKKYTGFIHMKAVAGMKMSYQVQQAIMASRKSIIRGFRHDETTSALCAH
LFSMVRGNRQHRRAFLISLLNLFDDSSKTDVNMLLFIADNLACFPYQSQEEPLFIMHHID
ITLSVSGSNLLQTFKESLLKEPRRREPKVKKERQSKNGSGGEEDEETCDSPRSDENSNPD
DDDEVVRRPKKSRRPVAVEEPSSESDLDLEDLDVEDVDRVMRRLPENSTPLLDFANASQG
ILLLLVLKQHLKNLYSFSDSKIQKYSPTESAKVYDKAVNRKTNVHFKPRQTIDFLSNNWA
NVVFTHDIKTRIVKQYLDFKTLMEHLDPDEEDEEGEAAQASTNIRNKAINALLGGAGHGH
LAPVEYDEDDESDEDERNPGSSRRARRSGDPGNLNESVDSMDVIAIHCPKHKDRPQLARV
IQKISTGYSVHWMSGSYSGPWADAKKRDGRKTVPWVDTIKESDIIYKKIALTSNHKLSNK
VAQTLRSLYAAKEGTSS
NT seq
7614 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactctcgctgggattgctagccttaca
gacttgttgaatcagctacccctgccctctcccctcccagccaccaccaccaaaagcctg
ctctacaatgggaggatcgcagaggaggtcaactgccttctggcctgccgggacgagaac
ctggtctcccagctggcccacggtcttaaccaggtttccacagagcacatagagctgaag
gacaacctgggcagtgatgagccagagggtgacgtgccggtgctgctgcagacggtgctg
tccaggaaccccggcatcttcagggagaaaaatgtcatgcagcagccgatggtgcaacag
tacaaaccaatacagaattccatgcatggcagcccagcccagtcagcaaactttcagcag
gcttcaatgtctcctaatccatccagccggggatttgtctccccacagtcgagctcaggg
agtcggttcatcccccagcagaacagccctgtgcccagcccgtacactccccagagccca
gctgggttcatgcagtaccctcacccgcccagctacaatcagcaccaacagatacagcaa
gccagccccatggtccctgggggcatgaggaacatccatgagaacaagggaccgatgacc
aacgctgcccaccaccacccagacagacaggaggactacatgagtatagtccacagactg
gggaacgaggagagtgacccctccatgagaaacgcctcgttccctctgaggtcgcctcag
cctgggtgctcacccgtgggaaacgaaggaacacccaaagctggctctaggccgccactc
atccttcagtctcctccgccgtacatgtctccccgggaaggccctccggacttgctactg
gagtctcccgaccagaggaagaaacagcagaagaagaagctggtgggcaaagaggacaag
gatgcgtacgacatcgtcacctcgccctccaaggacaccaccaagctgacgctgtcactg
tcacgggtcaagtcggaggaggtggaggaccactctggtgagctgctgccagtcatgatg
gatcagaactctgacctagagggcgagcttgggtaccagcaggtccctgtgctgcagaac
gtgggggttattaaagggcaggagggccctctctcatcgccttttgatgaggcggagctg
gacgccctggcggagattgagaggatagagcgtgagtcagccagtgagagggagcgctgc
tccaaagaggtgcaggataaagacaagcccctgaagaagcgaaagcaagactcgtttcca
ctggagcctggagcagggggcaccgcaggcaccaccggtgcgccaggcagcggaggaggg
ggaaatgcaggcaaactgatcccccaggaggctacagcggcaggaaacggagctagcaga
ccagccctcatggtcagcatcgaccttcaacaggcgggccgggccgacggccagcttgac
ccttgcatggctgcgcccatcccagccctggaggcgcaacgctggcccgaggagcctgcc
gagggccctgcagccgagggatccgacacggccggggtgctccggctcaaagccgacgat
cgacccgaagtcatcaagaacagcatggacaaacacgacaaccaccgtgagccttccagg
caccggcatgacggaaagcaagaccggcgccctgacacacctaagtcatcgagcagagag
cacgggcgggacagagaccgggagaggcggcacaggaatgaagacaggcgctcgccagag
gagcgctaccggccggacagccccagggtcaaacaggagggccgtggaggtggctttgac
cccagtgggcggcctcgcagcgacagacccggcttcaggtcccccagcggaggagagacg
gccagaaaccgcccagatggacacaaacaactacagcctgagagcaagtcaggagagttc
cctgcttacctgctgggggggcaagggtctgggggtctgaagaactttgtgatccccaag
atgaagcgggacggcggagctgtggacgtggcagaaggctggggccagccccgggtcaaa
ctggagcggctgggggttcgggggctagtggaccacataagtaagaggcccaagcctgtc
gtggtgctgcagaagctctcttttgatgaggtgcagaggatcatcagggttaaggatcgt
cacggctccaaatctggcaagaacaggctcctctcaggaaagtcaggcaaaggtggacta
gaccagtctgtgctggaagagcttcctcctgaactgttggcggagatggagtccaccatg
ccgctgtgcgagagggtgaagatgaacaagcgtaagcggagtacggtcaaagagaagccc
aagtacacagaggtcgactcagacgacgattccaacggggaatctgccaggaagcgccag
aggaagaaccggggggacaaggcctgggagtatgagccggagcgggagaggaggggctct
ggggagcataggcggagtaaggggttccaagagggacgtagaggctcaggcagttgctac
cgtgactcttctgatgaggagtcgcccccacccagcatgagtgacattgccaggcagatg
aagaaaaaagagattcagaaaaagaggaaagcctatgagcccaagctcactcaccaggaa
ctgatggactcgtccacattcaaaagattctcctccagcgttgacaacatcctagagaat
ctggaggatgtggacttcacgcagatggacgacgatgagatcccacaggagctgctgctg
ggtaaacagcagttgaacgagctgggcagcgagtcggccaagatcaaggccatgggcatc
acctgcaggatgccgtcggataagctggtgaaggtactgaatatcctggagaaaaatatc
caggatggggccaggctctcgacactcatgagccacgacaacgacgaagatgaggagaag
ctgtggcgagacctcattatggagcgcgtgaccaaatcggccgacgcctgtctgacggcc
ctcaacatcatgacgtccgcccacatgcccaaggcggtatacatggaggacgtgatcgag
agggttctccagtacaccaagttccacctgcagaacaccctctaccctcagtacgaccct
gtctacagggtggaccctcacggaggtggcctgctgagctccaaagccaagcgggccaag
tgctccacccacaagcagcgggtcattgtcatgctgtacaacaaggtgtgtgacatggtc
agcaacatctctgagctgctggagattcagctgctcaccgacaccaccatcctccagatc
tcctcaatgggcatcacccctttctttgtggagagtgtcagtgagctgcagctgtgttcc
atcaagctggtgacagcggtgttctcccgctatgagaagcacaggcagctgattctggaa
gagatcttcacatctctggccagactgcccaccagcaaacgcagtctccgcaacttcagg
ctgaacagcagcgacagggacggcgagcccatgtacatccaaatggttacagccctggtg
ctacagctcattcagtgcgtggtacacctcccaaacgaccgcgatgccatggaggacgag
tacaacagcaaggtagatcaggacttgctgatcaccaacaactacgagacggccatgagg
acagcccagaacttcctctcggtgttcctcaaaaagtgtggcagtaagcaggggagcgag
gaggactacaggcctctgtttgagaactttgtccaggacctgctctccacggtcaacaag
ccagagtggcccgctgccgagctactgttgagcctgttaggcagactgctggtgcaccag
tttagtaacaagcagacggagatgaccctgagggttgcctccctggactatctaggcacg
gtggccgctcgcctgcgcaaagatgccgtcaccagcaagatggaccagcgatccattgac
cgcatcctgaaagagacccaaggtgacgacgagacccagcaactgcagaaagcccttctg
gactacatggaggagaacacagagaccgacccttcactattgtttgccaggaagttctac
atagcgcagtggttccgcgacaccaccatagagacagagaagaccatgaagagccagaaa
cgggaccgggaagaggactcgtcggacggccctggtcaccacgccaaggacatcgagacc
attggggaggtcatgcagcgggccgaggcgcgcaagaagttcctccgcaagatcataaag
acggtcccctcccatttcaccaccctgagaatgaactctgacacggtggattacgacgac
tcctgcctcatcgtccgctacttagcctccatgaggccgttcgcccagagctttgatatt
tacttaacccagatcttgcgagtcctgggggagagtgcaatcgctgtccggacaaaagcc
atgaaatgtctgtctgaggtggtttctgtggaccctagcattctttccaggttggacatg
cagcgcggggtgcatggccgtctgatggacaactccaccagcgtgcgcgaggcggccgtg
gagcttctgggccgcttcgtgttgagccgaccccagctcaccgagcagtactacgacatg
cttatcgagaggatactggacacgggcatcagcgtgaggaagagggtgattaagatcctg
agagatatctgtctggagcagcccaccttcaacaagattacagagatgtgtgtgaggatg
atccgtcgggtcaacgacgaggagggcattaagaaactagtcaacgaaacattccagaag
ctgtggttcaccccgacaccggcccacgacaaagacactatgaccaggaagattctcaac
attactgacgtggtcacggcatgcaaagacacaggctacgattggttcgagcaactcctt
caaaatctgttgaaagtggaggaagatgctgcctacaaaccggcccagaaggcttgtgtg
cagctcgtggacaatcttgtggagcacatcctcaaatacgaggagtctcttacagaaagt
aaaggagtgaactctacccgcctggtgtcttgcatcaccactctcttcctgttcagcaag
atccgggctcagctcatcgtcaaacacgccatgaccatgcaaccctacctgaccaccaag
tgcaataacgccagcgacttcatggtgatctgtaacgtggccaagatcctggagctggtg
atccctctgatggagcacccttctgagaccttcctcaccaccatcgaggaagacctcatg
aaactcatcatcaaatacggcatgacggttgtccaacactgtgtcagctgcctcggcgcc
gtggtcaacaaggtgacccacaactataagtttgtgtggtcttgctttaacagatactac
ggtgctctgaccaagctgaagacgcagcaccaggaagatcccaacagtacagctctggct
gccaacaagccggccctcctacgctccctcttcaccgtgggagccttgtgtcgacacttt
gagttcgacatggaggagttcaagggcatcaccaaggtggtaatcaaagagaaggtgctg
gagctgctgctctactttaccaaacatgaggacgaggaggtgaagaccaaggctatcatt
ggcttaggcttcctggtgatcatgtaccctagccagatgttttccccggaggtgaagacc
ctgtacaacggcatcctggccgacaggagcacctcggtcaacttgaagatccaggtgttg
aagaacctgcagacctatctgcaggaggaggactcgcgcatgcaggaggctgaccagcat
tggaagaagctgtccaagcaggaggacctgaaggagatgggagatatctcatcgggcatg
agcagttccatcatgcagctgtacctcaagcaggtgctggaagccttcttccacacccag
tccagcgtgcgccactttgccctcaacgtcatcgcactcactctcaaccagggcctcatc
caccctgtgcagtgtgtaccgtacctcatcgccatgggaacggaccccgagcccagtatg
agaaacaaagcggaccagcagttggtggagatcgacaagaagtacaccggattcattcac
atgaaggcagtggctgggatgaagatgtcctaccaggtgcagcaggccatcatggcgtcc
cgcaagagcatcatccgaggcttccggcatgacgagaccacctcggccctctgcgcccac
ctcttctccatggtccgagggaaccggcagcaccggcgagccttcctcatctccctgctc
aacctgtttgacgacagctccaagactgacgtgaacatgctgctgttcatagccgacaac
ctggcctgtttcccctaccagagccaggaggaacccctcttcattatgcaccacatagac
atcacactgtctgtgtccggcagcaacctgctgcagaccttcaaagagtctctgttgaag
gagccgcggcgccgcgagcccaaagttaaaaaggagcgccagtcaaagaacggctctggc
ggggaggaggacgaggagacctgtgactcccctaggagcgatgaaaactcaaaccctgat
gatgatgatgaggtggtgcggcggcctaagaagtccaggaggccggtggctgtggaggaa
cccagctctgagtcggatttagacctggaagacctggacgtggaagatgtggaccgggtg
atgcggcgactgcctgagaactccacgccgctcctggactttgccaacgcctcgcagggc
atcctgctgctcctcgtgctcaaacagcacctcaagaacctttacagcttctcagacagc
aaaatccagaagtactcaccgactgagtcggccaaagtgtacgacaaggcggtgaacagg
aagaccaacgtccacttcaagccccgacagaccatcgacttcctgtccaacaactgggcc
aacgtggtgttcactcacgatatcaagacgaggatagtcaagcagtacctggatttcaaa
accctgatggaacacttggacccagatgaggaggacgaggagggcgaggcagcacaggcc
agcaccaacatccggaacaaagccataaacgcactgcttggaggggccggccacgggcat
cttgcaccagtagagtacgatgaggatgacgagagtgacgaagatgagagaaaccctggg
tcctctcggcgggcgagacgttcaggggaccccgggaacctcaacgagagtgtggactct
atggacgtcatcgccatccattgccccaagcacaaggaccgtccgcagctcgcccgggtc
atccagaagatcagcacaggctacagcgtgcactggatgtccggctcctactctggcccc
tgggccgacgccaagaaacgggacggacgcaaaacggtgccttgggtggacactattaag
gagtctgacatcatttacaaaaaaatcgccttgaccagtaaccacaaactgagtaacaaa
gtggcgcagactttacggtcactgtacgctgccaaggaggggacttccagttaa
DBGET
integrated database retrieval system
