Salvelinus namaycush (lake trout): 120031752
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Entry
120031752 CDS
T07522
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120031752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120031752
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120031752
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120031752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
WWE_5
DUF6479
zf-UDP
zf_RING_Vps8
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
120031752
NCBI-ProteinID:
XP_038833478
UniProt:
A0A8U0TYV3
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All DBs
Position
Sna3:complement(45108451..45134690)
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AA seq
618 aa
AA seq
DB search
MATASSSCVGRNVSRNGPSVSTPTSGAPGQSQPMVVVWEWQDDLGVWRPYSGQVSGYIEQ
CFSSSRGHRGGGPGSTSIWLGQSDPSLSPYLIDIPSLKQFRQDTGKTRSVRRQLFAQSSG
LGSGVYWEWVNDEGGWTPYETRTSILLEHSYQARQATADIVSHGYNYIVDLTALAQVNKA
TGYRRQVRRQGNLPYPLASGASVIHSGPACSCQQCLSHSSTGPMSSRSRHSFSSGQLSRP
SLQVPSRATGAHPTSVYSPYPRRPLSVGGMAWGGPWPLAPSASQLPGAQLAFSTSANGLS
IPTIPVQLNGSTSVSSALAGMASILMSAVGLGVRFMSAPSSAPPPPSSSSRPAGSKSRSS
VRREKRQHRTVPAQKPEDVIHRYMEEVASAQDEDCIICMDRLSCPSDYNVASEGAQSIQP
GAVGKFKCGHTLHMLCMLAMYNNGTKDGSLQCPSCKTIYGEKTGTQPKGKMEIYSISQSL
PGHPDCGTIQIIYSITQGIQGPEHPNPGQSYTSRGFPRFCFLPDNKKGRKVLELLKVAWT
RRLIFTVGTSSTTSEPDTVVWNEIHHKTEMMSNVSGHGYPDPNYLDNVLSELASQGVTDD
CLLRQEGPSQGGASNSRL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcctctagctcctgtgtggggagaaatgtgtctagaaatggaccctctgtc
tcgaccccgacctcgggagcacctggacaatcacagcctatggtcgttgtatgggaatgg
caggatgatcttggcgtctggcggccgtacagcggccaggtgagcggctacatagaacaa
tgtttctcttcttcgcggggacacagaggtgggggtcctggctccaccagtatctggctc
ggacaatcagatcccagtttgtcgccttatcttatagacataccaagcttgaagcagttc
cgccaagatacagggaaaacgcggtctgtacgccgtcaattgtttgcccagtcctcaggc
ttgggtagcggagtatattgggagtgggtgaatgacgaaggaggatggactccatacgag
actcgcacttctatcctactagaacacagctaccaggcacggcaggccacggcggacatt
gtctcacacggctataactacatagtggacctcacggcgctggcccaggtcaacaaggcc
acgggctaccggcggcaggtacgacggcagggtaacctcccctacccactggcatctggt
gcatccgtcatccactcgggcccggcctgctcctgccagcagtgtctgagccacagcagc
actggccccatgtccagccgctcgcgccactccttctcgtcggggcagctgagccggcct
agcctccaggtccctagcagggcgactggagctcaccccacctcagtgtactcaccctac
cccaggaggcctctttctgtggggggaatggcgtggggaggcccctggccactggcaccc
tccgctagtcaactccctggagctcaactggccttctccaccagtgccaatggcttaagt
atccccaccatccctgtgcaactgaatggatccaccagtgtgagctcagccctggcaggc
atggcctccattttgatgtcagcagtgggactcggcgtgcgcttcatgagtgccccctcc
tccgctcctcctccccccagcagcagcagcaggcccgcgggctccaaaagtcgcagctcg
gttaggagggaaaagaggcagcacaggacagtcccggcccagaaaccagaggatgtcatt
caccgctacatggaggaagtggcctctgctcaagacgaggactgcatcatctgtatggac
cggctgtcttgtccgtcggattataacgtggcgtctgagggagcccagtccatccagcct
ggcgccgtgggcaagttcaagtgtggacacacactgcacatgctctgcatgctggccatg
tacaacaatggtaccaaggatggcagcctccagtgcccctcatgcaagacaatctacggg
gagaagactgggacccagcccaaggggaagatggagatctatagtatctcccagtccctc
cctggccaccccgactgtggaactatccagataatttacagcatcacccaagggatacag
ggtccagagcaccctaatcccgggcagtcgtacacctctagaggcttccctcgcttctgc
ttcctcccagacaacaaaaagggcagaaaggtgctggagctgctgaaggtggcgtggaca
cggcgcctcatttttacagtgggaacgtccagcaccacgagcgagcccgatacggtggtg
tggaacgagatccatcacaagacggagatgatgtccaacgtgtcgggccatggctacccg
gaccccaactacctggacaacgtgctgtccgagctggcctcccagggggtgaccgacgac
tgcctcctcagacaggagggccccagccaggggggagcgtcaaactctagactgtga
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