Salvelinus namaycush (lake trout): 120031770
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Entry
120031770 CDS
T07522
Name
(RefSeq) optineurin-like isoform X1
KO
K19946
optineurin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04137
Mitophagy - animal
snh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120031770
04137 Mitophagy - animal
120031770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120031770
Membrane trafficking [BR:
snh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120031770
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120031770
Autophagy
Mitophagy
PINK1-Parkin associated proteins
120031770
Xenophagy
Cargo receptors
120031770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
CENP-F_leu_zip
WipA_N
TMF_DNA_bd
DUF4248
EDR4-like_1st
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
120031770
NCBI-ProteinID:
XP_038833510
UniProt:
A0A8U0TZB7
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All DBs
Position
38:9939810..9959258
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AA seq
567 aa
AA seq
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MYCPLACLHTASPCCRVMASSSPMVNGDISRGSSSHPGHSPTTGTLEETLQQMNRLIQEN
RDLKEALKQTNMSMKERFEGLSVWRDKQREEKEFLEGRLDEARGRVEALSSHNQELSMKV
EELEGEGKGQAETANQNAELEALRAQLVRLQAEKSDLVAMNSELQLKTGQGSEDDSFIEI
RIAREDTGKDLYHNERDPRYDMSVSRQESEELTVSQLLQSLRKETQRVEWLQIELQATKS
RITELEEKETNTESSTQTSLLPEVVSPALATTACGTEPEAEPQQNSGKEKAASEVEDLKA
QMMTLFNELQQAQSKLGEAEGMKKNLQDRCRDVEQEVVTLTAQLVEKQEVQSENDRLKLQ
VDSMKAQSQLEQRKAGEERTNLTQLKDAYTKLFEDYNELKQESKNREPLVTKEVGDLQTR
LDAAEKALAAKQQQIDVMKQEIYQKEKELETISVFQAQAEVYSSDFYAERAAREKIHEEK
ERLFAQLEFVKKQNTQLQDEVDSLGRQSLSDMQRRHMPRGGNMQGARGGDARDWQQQGNI
PEHVCPKCNEILPDLDSLQIHIMDCII
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtccacttgcatgtctccacaccgcctcaccttgctgtagagtgatggcgtcc
agctcccccatggtgaacggggacatctcccggggttctagctctcacccaggccacagc
cccaccacaggcaccctggaggaaacgctgcagcagatgaaccgcctcatccaggagaac
cgagacctgaaggaggcgctgaagcagactaacatgtcgatgaaggagcgtttcgagggt
ctgtctgtgtggagggataagcagagggaggagaaggagttcctggaggggaggcttgat
gaggcgcgcggccgtgtggaggccctctcctcacacaaccaggagctcagcatgaaggtg
gaggagctggagggagaagggaagggacaggccgagacagccaatcagaatgcagaactg
gaggcgctgcgtgcccagctggtgcgtctgcaggcagagaagagtgacctggtggccatg
aactctgaactccagctcaagacaggtcaggggtcagaggacgactccttcatagagatc
aggattgctagagaggatactggaaaggacctgtatcataatgaaagggaccccaggtat
gacatgagtgtatccaggcaggagtctgaggagctgactgtcagccagctgctccagtcc
ctgaggaaggagacccagagggtggaatggctacaaatcgagctccaggctaccaaatcc
agaatcacagagctggaggagaaagaaactaacacggagagctccacacagacctcacta
ctgccagaggtggtttccccagcactagccaccacagcatgtggtactgaaccagaggcg
gagccccaacagaactctgggaaggagaaggctgcgtcagaggtggaggatctgaaggct
cagatgatgaccctgtttaatgagctacagcaggctcagagcaaactgggcgaggcagag
ggcatgaagaagaacctgcaggacagatgtagggatgtggagcaggaggtggtgactctg
acagcccagctggtagagaagcaggaggtacagagtgagaatgacagactgaagctgcag
gtggacagcatgaaggcccagagccagctagagcagaggaaggctggagaggagaggact
aacctgacccagctgaaggatgcctacaccaagctattcgaggactacaatgagttgaag
caagagagcaagaacagagagccacttgtcactaaggaggtgggagacctgcagaccaga
ctggacgcagcagagaaggccctggctgctaagcaacagcagatagatgttatgaagcag
gagatatatcagaaggagaaggagctggagaccatctctgtgttccaggctcaggcggag
gtgtactcctctgacttctacgcagagcgagcagctcgggagaagattcacgaggagaag
gaacgtctgtttgctcagctggagtttgtcaagaaacagaacactcagttacaggacgag
gtggactcactgggcaggcaatctctgagcgatatgcagagaagacacatgccacgtgga
ggcaacatgcagggagccagaggtggtgatgccagggactggcagcagcaggggaatata
ccggagcacgtctgccccaagtgtaacgagatcctaccagacctggacagcctgcagatt
cacatcatggactgcatcatctga
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