KEGG   Salvelinus namaycush (lake trout): 120031770
Entry
120031770         CDS       T07522                                 
Name
(RefSeq) optineurin-like isoform X1
  KO
K19946  optineurin
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04137  Mitophagy - animal
snh04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:snh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120031770
   04137 Mitophagy - animal
    120031770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:snh04131]
    120031770
Membrane trafficking [BR:snh04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    120031770
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    120031770
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    120031770
  Xenophagy
   Cargo receptors
    120031770
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 CENP-F_leu_zip WipA_N TMF_DNA_bd DUF4248 EDR4-like_1st zf-C2H2
Other DBs
NCBI-GeneID: 120031770
NCBI-ProteinID: XP_038833510
UniProt: A0A8U0TZB7
LinkDB
Position
38:9939810..9959258
AA seq 567 aa
MYCPLACLHTASPCCRVMASSSPMVNGDISRGSSSHPGHSPTTGTLEETLQQMNRLIQEN
RDLKEALKQTNMSMKERFEGLSVWRDKQREEKEFLEGRLDEARGRVEALSSHNQELSMKV
EELEGEGKGQAETANQNAELEALRAQLVRLQAEKSDLVAMNSELQLKTGQGSEDDSFIEI
RIAREDTGKDLYHNERDPRYDMSVSRQESEELTVSQLLQSLRKETQRVEWLQIELQATKS
RITELEEKETNTESSTQTSLLPEVVSPALATTACGTEPEAEPQQNSGKEKAASEVEDLKA
QMMTLFNELQQAQSKLGEAEGMKKNLQDRCRDVEQEVVTLTAQLVEKQEVQSENDRLKLQ
VDSMKAQSQLEQRKAGEERTNLTQLKDAYTKLFEDYNELKQESKNREPLVTKEVGDLQTR
LDAAEKALAAKQQQIDVMKQEIYQKEKELETISVFQAQAEVYSSDFYAERAAREKIHEEK
ERLFAQLEFVKKQNTQLQDEVDSLGRQSLSDMQRRHMPRGGNMQGARGGDARDWQQQGNI
PEHVCPKCNEILPDLDSLQIHIMDCII
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgtattgtccacttgcatgtctccacaccgcctcaccttgctgtagagtgatggcgtcc
agctcccccatggtgaacggggacatctcccggggttctagctctcacccaggccacagc
cccaccacaggcaccctggaggaaacgctgcagcagatgaaccgcctcatccaggagaac
cgagacctgaaggaggcgctgaagcagactaacatgtcgatgaaggagcgtttcgagggt
ctgtctgtgtggagggataagcagagggaggagaaggagttcctggaggggaggcttgat
gaggcgcgcggccgtgtggaggccctctcctcacacaaccaggagctcagcatgaaggtg
gaggagctggagggagaagggaagggacaggccgagacagccaatcagaatgcagaactg
gaggcgctgcgtgcccagctggtgcgtctgcaggcagagaagagtgacctggtggccatg
aactctgaactccagctcaagacaggtcaggggtcagaggacgactccttcatagagatc
aggattgctagagaggatactggaaaggacctgtatcataatgaaagggaccccaggtat
gacatgagtgtatccaggcaggagtctgaggagctgactgtcagccagctgctccagtcc
ctgaggaaggagacccagagggtggaatggctacaaatcgagctccaggctaccaaatcc
agaatcacagagctggaggagaaagaaactaacacggagagctccacacagacctcacta
ctgccagaggtggtttccccagcactagccaccacagcatgtggtactgaaccagaggcg
gagccccaacagaactctgggaaggagaaggctgcgtcagaggtggaggatctgaaggct
cagatgatgaccctgtttaatgagctacagcaggctcagagcaaactgggcgaggcagag
ggcatgaagaagaacctgcaggacagatgtagggatgtggagcaggaggtggtgactctg
acagcccagctggtagagaagcaggaggtacagagtgagaatgacagactgaagctgcag
gtggacagcatgaaggcccagagccagctagagcagaggaaggctggagaggagaggact
aacctgacccagctgaaggatgcctacaccaagctattcgaggactacaatgagttgaag
caagagagcaagaacagagagccacttgtcactaaggaggtgggagacctgcagaccaga
ctggacgcagcagagaaggccctggctgctaagcaacagcagatagatgttatgaagcag
gagatatatcagaaggagaaggagctggagaccatctctgtgttccaggctcaggcggag
gtgtactcctctgacttctacgcagagcgagcagctcgggagaagattcacgaggagaag
gaacgtctgtttgctcagctggagtttgtcaagaaacagaacactcagttacaggacgag
gtggactcactgggcaggcaatctctgagcgatatgcagagaagacacatgccacgtgga
ggcaacatgcagggagccagaggtggtgatgccagggactggcagcagcaggggaatata
ccggagcacgtctgccccaagtgtaacgagatcctaccagacctggacagcctgcagatt
cacatcatggactgcatcatctga

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