Salvelinus namaycush (lake trout): 120031810
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Entry
120031810 CDS
T07522
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120031810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120031810
G protein-coupled receptors [BR:
snh04030
]
Frizzled / Smoothened family
120031810
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Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
120031810
NCBI-ProteinID:
XP_038833559
UniProt:
A0A8U0TY71
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Position
Sna38:8088720..8104319
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AA seq
831 aa
AA seq
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MSSHGWSAIVGVLGMLCVWAASFLATHAVTVQRNETIFNDFCKKTTTCEVLKYNTCLGSP
LPYTHTSLVLAEDSSTQDEAFEKLAMWSGLRNAPRCWAVIQPLLCAVYMPKCDNGQVELP
SQHLCQATRRPCSIVDQERGWPNFLKCEETDKYPMGCTNEVQKLKFNTSGHCEAPLVKTD
VQASWYKDVEGCGIQCNNPLFTDEEHSDMHAYIAVFGTVTLLCTFFTLATFLADWKNSNR
YPAVILFYINTCFFMGSIGWLAQFMDGARKEIVCKSDNTMRLGEPSSTETLSCVIIFSLV
YYSLMSGVIWFVMLTYAWHTSFKALGTTHQPLSGKTSYFHMVTWSVPFILTVAILATAEV
DGDSVSGICFVGYKNYRYRAGFVLAPIGVVLVIGGYFLIRGVMTLFSIKSNHPGLLSEKA
ASKINETMLRLGIFGFLAFGFVLITFGCHFYDFFNQAEWEKSFREYVLCEANVTIAHQTN
KPIPECTIKNRPSLLVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWCKVIGRSDDEPK
RIKKSKMIAKAFSKRKELHKDPEKELSFSMHTVSHDGPVAGINFDLNGEPSNEMSSAWAQ
HVTKMVARRGAILPQDISVTPTGTPVPPPEERNKLWMVEAEISPEMMKRKKKRKKRNKEA
RPLEELAEHQGYRRREFGTSSVPRLPKLPGHRSLVANLRQHQEEAEDVLPGSYSEFRPSH
PLPYQERYGGALGASSSQRSRYPDLNPLSLSDLPEDLGLGPRCRPQQPPPSFWQPNGAFH
CSGEVAPMAGVSGRTDYVGRSHGGQRRAEWGQIHSRTNLMEEELMDADSDF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccatggctggagtgccattgttggtgtgttggggatgctttgcgtttgggct
gcctcctttctggctactcatgcggtaacggtacagagaaacgaaacaattttcaatgat
ttctgcaagaaaactacaacatgtgaagtgctgaagtataatacatgtcttgggtcccca
ctaccgtacacgcacacgtctcttgtcttggctgaagactcaagtacccaagacgaagca
tttgagaagttggccatgtggtctggtctgaggaacgcccctcgctgctgggcggtcatc
cagcccctgctgtgtgccgtctacatgccaaagtgtgacaacgggcaggtggagcttccc
agccagcacctgtgccaggctacgcgtcgcccctgcagcatcgtggaccaggagaggggc
tggcccaacttcctcaagtgtgaggagacggacaagtaccccatgggctgcacgaacgag
gtgcagaagctgaagttcaacacgtcgggacactgcgaagcccccctggtgaagacagac
gttcaggccagctggtacaaagatgtggagggctgcggcatccagtgcaacaaccccctg
ttcaccgacgaggagcactcagacatgcacgcctacatcgctgtgttcggcaccgtcacc
ctgctctgcacctttttcactctggccacctttctggcggactggaagaattcaaaccgt
taccccgccgtcatcctcttctacatcaatacctgtttcttcatgggcagtatcggctgg
ctggctcagttcatggatggagctcgcaaagagatcgtgtgtaagagtgacaacaccatg
cgtttaggggagccctcgtctaccgagactctgtcgtgtgtcatcatcttcagcctcgtc
tactactccctgatgtctggggtgatttggttcgtcatgctgacctacgcctggcacacg
tccttcaaggccctgggcaccacccaccagcctctctcgggcaagacctcatacttccac
atggtcacatggtccgtccccttcatcctcactgtggctattctagccactgctgaggtg
gacggagactctgtcagtgggatctgtttcgtgggctataagaactaccgctaccgtgct
ggctttgtgttggctcccattggagttgtgcttgtcattggtggctatttcctcatacga
ggagtcatgacattgttctccatcaagagtaaccacccaggtcttctgagtgagaaggca
gcgagcaaaatcaacgaaacaatgctaagacttggtatatttgggttcctggcgtttggc
tttgtcttaatcacgtttggctgccacttctatgacttcttcaaccaggctgagtgggag
aagagcttcagagaatatgtgttgtgcgaggccaatgtgacgatcgctcatcagaccaac
aagccgatcccagaatgtactatcaagaaccgtcccagtctactggtggaaaagattaat
ctgttctccatgttcggcacgggcatcgccatgagcacctgggtgtggaccaaggccact
atcctcatctggaaacgcacctggtgcaaggttatcggccgtagcgacgatgagcccaag
aggataaagaagagcaagatgatagccaaggccttctccaagcgcaaggagctccacaaa
gacccggagaaggagctgtccttcagcatgcacactgtctcccatgacgggccagtagct
ggcatcaactttgacctgaacggggagccatccaacgagatgtcttcagcctgggcccag
catgtcaccaagatggtggccaggaggggcgccattctgccgcaggacatctctgtcacc
cctacagggacacctgttccaccgccagaggagaggaacaagctgtggatggtggaggcg
gagatctcccctgagatgatgaagaggaagaagaagaggaagaagaggaataaggaggcg
cgccctctggaggagctggccgaacaccagggctaccgtcggcgagagtttggcaccagc
tcggtgccacggctacccaagctgcccggccacaggagcctggtggccaatctgaggcag
caccaggaggaagctgaggacgtccttccaggctcttactctgagtttaggccctctcat
cccctgccctaccaggagaggtacggaggagccctgggggcatcctctagccaaaggagc
aggtaccctgacctcaaccccctctccctcagcgacctgccagaggacctcggcctgggg
cctcgctgccgcccccaacaaccacccccctccttctggcagcccaacggagcgttccac
tgctccggggaggtggcgcctatggcaggggtgtctgggaggacagactacgtggggagg
tcgcatgggggtcaaaggagggcggagtgggggcagattcactctagaaccaacctgatg
gaggaggagcttatggatgctgactctgacttctga
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