Salvelinus namaycush (lake trout): 120031824
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Entry
120031824 CDS
T07522
Name
(RefSeq) caprin-2-like
KO
K18744
caprin-2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120031824
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120031824
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GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
120031824
NCBI-ProteinID:
XP_038833572
UniProt:
A0A8U0Q073
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Position
Sna38:complement(11105593..11112134)
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AA seq
942 aa
AA seq
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MVQLSPSPARDVSPSPECSEKGRQGSPKACSPKMGSSGGLGPLQLALAASTTIYQGYESY
IEDGLICLKHKIRNLEKKKIKLEDYRKRLKHGESLNQDQIDAVEKYDEVIHNLQFAQELH
KTLGGLTQELLKAQKKALRKEQMAKQEVEKRRLCVVLQVKFLLQTLLQHEHIREDLLSAR
KLQVAELQSLLELAELLGVKRDNNVSLEEQMESAALVYLDLLEGNNKPIAGTTYKVLKAK
LAKLMDCGYFDCVPPPPSKSPKEVEVPMTKKTVSQTASLSTLMTSNKKDVPSREFLNRHY
LPDTDPNGCRDTPVTQNWKAEFQAMKEQEPPDSWDMESDSTQPVIQKPWRGAAVFISKVP
VTTKKQNAEPKQRRAKSKRERDATAVSRLLRLLRLMDLSILRHHIVFNSQSSLPKDPILR
KQQLEDLMTKIRGSFSFMQDSLLDGEGSPTNGHPRLGRRASGSSSPLVQRESRRSPVDHL
PKTLHSTPLPSKLLPVDDEPNLTNGDGGCLESCELDLTTEDLAHVITIDPCLLLSESETA
CPSPPPFYRGESSISITLDEKTSARTTISESGKQSPCNGVVPPCTPTPTQGQSFSTPPSR
RTLSMVPFQTMHSVFKVNAPLLPTGDFKSDIIPYSDSNNLCYVTTSTQTPPEFAPSEDEH
LQSVNQSECLVGSGGQIFLSPSQSCGTMGRSDQSYYKGSVRGGFDGFRAGLRSPGGSFIP
QAHLYGARDTGYQHSYRRGGGNAGQRHNGGWSDSSQVSSPDREGNYSLVDSAHGDSLQGV
GMDLTPQVTPHAPHTLMHVPMYPLPQHPQLLRVAFTAARTANYTPGTLDQPIAFDQLHSN
LGEMFNTNVGRFTCPANGTYVFLFHILKLAVNVPLYVNLMRNDEVMVSAYANDGAPDHET
ASNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccatccccagcccgggatgtgtctccttcacctgagtgctccgag
aaggggaggcaggggagcccgaaggcatgtagccccaagatgggctcctctggtgggctg
ggtcctctccagctagccctggcagcctccaccaccatctaccagggctacgagagttac
atcgaggatggcctcatctgcctcaagcacaagatccgcaacctggagaaaaagaagatt
aaattggaagactacaggaagcgtttgaaacatggggaatcactcaatcaagaccagata
gatgcagtggagaagtatgatgaagtgatccacaacctgcagtttgcccaggagctgcac
aagacccttgggggcctaacacaggaactgctaaaagcccagaagaaggcgttgaggaag
gagcagatggccaagcaggaggtagagaagaggaggctgtgtgtagtgctgcaggttaag
ttcctcctgcagaccctgctgcagcacgagcacatcagggaggacctcctctctgcccgc
aagctccaggttgcagagctacaaagcctgcttgagctcgctgaactactgggggtgaag
agggacaacaatgtgagtttggaggagcagatggagagcgcagccctggtctacctggac
ctgctggaggggaataataaaccaatagctggaaccacctacaaggtcctgaaggctaag
ttggcgaagctgatggattgtgggtactttgattgtgtaccgccgcctccgagcaagagt
cccaaggaagtagaggttcccatgaccaagaagacggtgtctcaaacagccagcctctct
accctaatgacgtcaaacaaaaaagacgtgcctagcagagagtttcttaacagacactac
ctgcctgacacagaccccaatgggtgtcgagacactcccgttactcagaactggaaggct
gagttccaggccatgaaggaacaggagccaccagactcgtgggatatggagtcggactcc
actcagcctgtaatccagaaaccatggagaggggcggctgtgttcatctctaaagtgccg
gttactaccaagaaacaaaatgctgaacccaaacagagaagagcgaagtccaaaagggag
cgggacgccacagctgtgagtagactcttgcgtctcttacgtttgatggacctgtccata
ttacgccatcacattgtgttcaactcccagtcttccttgcccaaggaccccatcctgcgc
aagcagcagctggaggacctgatgaccaagatcagaggctccttcagcttcatgcaggat
tctcttctggatggagaaggatcacccactaacggccatcctagactgggccggcgtgcc
tctggatcctcctctccactcgtacagagggagtcaaggagaagcccagtggaccatcta
cccaaaacactgcattccactccattgccttctaaactcctccctgttgatgacgaaccc
aatctgaccaatggagacgggggttgtctagagagctgtgagctggacctaactacagag
gacctagctcacgtcataaccattgatccatgtctgctgctgtctgagagtgagactgcc
tgcccctctcctcctcccttctaccgtggggagtcctccatctccatcaccctggacgag
aagacctctgctcggactaccatctctgaatctgggaagcaatccccctgtaacggggtg
gtgcctccttgtaccccaacccccacccaggggcagtcgttttctacccctcccagcaga
cgtacactcagcatggtccccttccagaccatgcattcggtattcaaggtgaacgccccc
ttacttccgactggagactttaaatccgatattatcccctattcggactccaacaacctg
tgctatgtcaccaccagcacccagaccccaccggagtttgctccgtcggaggacgaacac
ctacagtcggtgaaccagtctgaatgtctggtgggtagtggtgggcagatcttcctgtcc
cctagccaatcctgtggcaccatgggccgttctgaccaatcatactacaaaggatctgtt
agaggtgggtttgatgggtttcgggctggtctgcgctccccaggaggaagcttcatcccc
caggctcacttgtacggcgctcgggacactggctaccagcacagctacaggcgtggtgga
ggcaatgcaggacaaaggcacaatggtggttggagtgactcctcccaggtgagcagccca
gaccgggagggcaactactccctggtggactccgcccacggcgactcgctgcagggtgtt
ggcatggacctcaccccccaggtgacccctcatgccccccacaccctgatgcacgtaccc
atgtacccgctcccccagcatccccagctcctccgcgtggccttcacagcagcccgcaca
gccaactacaccccgggcaccctggaccagcccatcgcctttgaccagctccacagcaac
ctgggggaaatgttcaacaccaatgtgggtcgtttcacctgcccagccaacggcacctac
gtcttcctcttccacatcctcaagctggcggtcaacgtgccgctctacgtcaacctgatg
cgcaacgacgaggtgatggtgtctgcgtacgccaacgacggggctccggaccacgagacg
gccagcaaccactccatcctgcagctgtaccagggagaccaggtgtggctgcggctgcac
cgcggctccatctatggcagcagctggaagtacagcactttctctggcttcctgctctac
caggactga
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