Salvelinus namaycush (lake trout): 120031844
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Entry
120031844 CDS
T07522
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120031844 (si:dkey-159a18.1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
120031844
NCBI-ProteinID:
XP_038833592
UniProt:
A0A8U0PYV4
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Position
38:13628934..13648788
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AA seq
719 aa
AA seq
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MRTNAKSSHGQRGIPQLLQDPLSPLTGFHGDDGSSFTVTWVGDGTGVILVLSTISAPLDS
FFEGGSSRLYRSADYGKSFHDISHLINNTFIRKEFGLLAGPGNSQQVILTADTPVLDNPG
GVIFTSTDAGVSFKSVQLPFHPAQPITFHFLNPEYLVVISIDGGLWLSLDFGAVWTKVHE
GTQSFTWGSGITLFFSFSPKGTVEADRRGELFLKRTEDLGKTFTTVAHSIFSFGYVGSFL
FTSVIETLGAPRVIYVSSDQGDHFNKAQLPSASTEQFYSVLDGDEDMIFMHVDNPGGTES
YFGTVYTSDDRGILYSKSLERHLFGGEGKSDFTNVTSMRGVYLTNVLEEDGRIRTVISFN
RGGEWTLLNKPQNVECGEDSRNDCNLHIHGEHSRYNGITPMLPLSDPTAVGLVIAHGSVG
DSISSTRPDVYVSEDGGYKWRGSLRGPHHYSILDAGGLVVAVEAHPMDGQINTIKFSTDE
GQCWKVYNFTEQPIFFAGLTSEPGTKTMNISVWGYRPEDDHQPMWVVVTIDFQSLLTREC
GNQDYVQWLAHAREGGDLATEGCVLGYKEIFRRLRKLSVCRNGRDYVVSRQKSPCPCTRE
DYLCDYGYYRHENSSECMRQLDTADHALEVCLNGEEEELRTSGYRKVPSDKCEGGFTPLH
RKETVNSHCGNSSQPPTASPYSETPLQDDDCSIAADPESVASSNGTSVFQVDSDDDLIQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccaacgccaagtcctctcacggccagagagggataccacagcttctccaagac
ccactttcaccgcttacagggtttcatggtgacgatggctccagttttactgtcacatgg
gttggagacgggacaggagtaatcttggtgttgtctacaatcagtgctcctctagattcc
ttcttcgagggcggttcttcacgattgtaccgcagtgcagactatggcaagtctttccat
gatatttctcatctcatcaacaacaccttcataaggaaggaatttggacttctggctgga
ccagggaactctcaacaggtgattctgactgcagacacaccggttttggacaaccccggt
ggcgtcatctttacctcaactgatgccggagtgtcgtttaagtctgttcagctgcctttt
cacccggcccagccaatcaccttccacttcttgaatcccgagtacttagtggttatcagc
atagatggcggcctgtggctttctctggactttggggctgtgtggacaaaggttcacgaa
ggaacacaatctttcacgtggggctccggcatcactctcttcttcagcttcagtcccaaa
ggaacagtggaggcagacagaagaggagagctgttcctgaagaggacagaagacctgggg
aagacgttcaccaccgtggcacacagcatcttctccttcggctatgtaggaagcttcctc
ttcacctcagtcatagagacactgggagccccacgtgtcatctatgtgtcctcagaccaa
ggggaccacttcaacaaggcccagctcccctccgcctccactgagcagttctactcggtt
ctggatggggatgaggacatgatcttcatgcatgtggacaatccaggaggtactgaaagc
tactttgggacggtgtacacgtcagatgaccggggcatcctgtactctaagtctctagag
cgccacctctttggtggggaagggaagagcgacttcaccaacgtcacctccatgagagga
gtgtacctcaccaacgtactggaggaggacggccgcattcggacagtcatttcatttaac
cgagggggagagtggacactcctcaacaagccccagaatgttgagtgtggtgaggattca
agaaatgattgtaacttgcacatccacggtgagcacagtcgctacaacggcatcactccc
atgctgcctctctctgaccccactgccgttggccttgtcatcgcccacggcagtgtgggg
gactccatctcgtcaacacggcctgacgtgtacgtgtcagaggacggggggtacaagtgg
aggggttccttgagggggccccatcactacagcatcctggatgctggggggctcgtcgtg
gctgtggaggcccaccccatggacggccaaatcaacaccatcaagttctccacagatgag
ggccagtgttggaaggtgtacaactttacagagcagcccatcttcttcgctggcctgaca
tccgagccgggcaccaagaccatgaacatcagcgtgtggggctaccggcccgaggacgac
caccagcccatgtgggtggtggtcaccattgacttccagagtctcctcaccagagagtgt
ggtaaccaggactatgttcagtggttggcccatgccagagagggcggggacttggccaca
gaggggtgtgtcttgggctacaaggagatcttcaggaggctgaggaagctgtccgtctgc
aggaatggacgggactacgtggtgagcaggcagaaaagcccctgcccctgcaccagagag
gactacctatgtgactatggttactatcgtcatgagaacagctcagagtgtatgagacaa
ctggacactgcagaccacgccctggaggtgtgtctaaatggagaggaggaggagcttagg
acgtcggggtaccgtaaggttcccagtgataagtgtgagggaggtttcactcccctgcac
agaaaggaaacagtcaacagtcattgtgggaactccagtcagccccccactgccagccca
tattctgaaaccccgcttcaggacgacgactgctccattgccgccgacccagagagtgtc
gccagtagcaacggaacatcagtcttccaagtggattcagatgatgatcttattcaatga
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