Salvelinus namaycush (lake trout): 120031913
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Entry
120031913 CDS
T07522
Symbol
zbed4
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24640
zinc finger BED domain-containing protein 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120031913 (zbed4)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120031913 (zbed4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
120031913
NCBI-ProteinID:
XP_038833686
UniProt:
A0A8U0TZN8
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All DBs
Position
Sna38:complement(1093669..1100079)
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AA seq
1270 aa
AA seq
DB search
MDGEEDLSLKSEEDVVDSETNGIENKKREAKGTCLKIEGQDGYVFKSYSITPHDTADAKT
CPSKTLAKDSSPVASIHEEEPDNLSISQVDGQFKMNGSVNETGEACDKENSLRPTSPAIS
NKSLNLNTEIKIENDTSEHIEEDDPNSMEEGTQEDERLSYDSSVGPFVTRDNTDDYSSML
SGYTSTLYDVAMDAVTQSLLSSMRSPANANPRKKSPAWNHFCISPRDSTKAICMYCMKEF
SRGKNEKDLSTSCLMRHVRRAHPTVLLQDCDLSSNTLTASAASSVISPSNNGSLAASITT
PAAQNNSSPSTSSAEGSDISSSKEVLPKLEPKLEKGPKNNTGTVSSSHSNNNHEEAMDGG
GSERLAATPKNSSSRRRSAVWKHFYLSPADSSKAVCIHCMNEFSRGKNGKDLGTSCLIRH
MWRAHREIVIEENGQGSNIPPPYTNPPTLLSRSQLHQDSVVDIKKESPFAPSSPETISDK
VPHNEGESMDVKESDTINQLEQDSSLNLCFGLRDEDVPLPSSPCDLSLEGSGLKEDPASS
IFQQNKKIMKRVKSEVWHHFIVSPGDQLKALCRYCPCVISRGKRGDFGTSCLMRHLMRRH
PDVLKNQKSTNDKDSSPHPYAILSAAEAVPAKLTNSPAKEKKPHNSVFSKKTSKLWNHFS
ISPSDPTKVVCLHCSRTISRGKKTTNLGTSCLFRHMQRFHGNVLESNSTISGDVPSAEIH
VKHELMDTSVYDENCERFDDYHPVAKKITKLVAEMLALDLQPSALVENTGLNRLLEYLQP
QYSLPSSSYFTSIAIPDMYERVKEVVLTHLKEAESGIVHFTTSIWVTSQTREFLTLTAHW
VSYESCVRPQGEDFHCSALLSVSQIDCDHDMLNIQKQLEYFWDTWISSLGLKKGFTVTDN
NAIANVLEDNNHVIVQCFGHTIDLIVSEAIKSQRMVQNLLSIARKICERVYRSDKAKEKL
AELQKVYQLPENCLIQDVPSKWRTSFFMLERLVEQKKAVDEMSIECNFREMISCDQWEVM
QSVCNALKPFEVACREMSNRTASLGQVIPLIHILNRKIDMLFDETMGIDNMLKSLKEAMV
SRMSSTLRNPRYTWATMLDPRYKASLFTEEEAEQCKQDLISELQVSLSTSIETKPSLSNG
CGGEVPASSNGSPSNNKDNLWALMDDIRHKIKQEDKPKSSELAVLEYLEEDILDQSCDPL
DYWNLKKLLWPDLAKVAVRYVGCPPSIVPAEILFSTASVNCTLNQPMPLLENMEGLLFLK
VNLPLIYYQH
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggatggagaggaagacctctctcttaagagtgaagaagatgtcgtagattcagaaact
aatggcatagaaaacaagaaaagagaggcgaaaggaacatgtctaaaaattgaggggcaa
gatggctacgtgtttaaatcatacagcattaccccccatgacactgcagatgcaaagacc
tgtccatctaaaacactggctaaagactcttcccccgtggcttcaattcacgaggaggaa
ccagacaatttatctatttctcaggttgatggacaatttaaaatgaatgggtctgtcaat
gaaacaggtgaggcatgtgacaaagagaactctcttaggcctacttctccagccatttca
aacaaaagcctaaatctaaacactgagatcaagatagaaaatgacacatctgaacatatt
gaggaagacgatccaaacagtatggaggaggggacccaagaggatgaaaggttatcatat
gatagttctgtcggcccctttgttactagagacaatacagatgattacagtagtatgctt
agtgggtacacaagcactctttatgatgttgcgatggatgctgtcactcaaagtctattg
tcatccatgagaagtcccgctaatgctaatcccaggaagaaatcccctgcctggaaccat
ttctgcatatctccacgtgatagtaccaaagcaatctgtatgtactgtatgaaagagttc
agtcgaggtaagaacgagaaggacctcagtacaagttgtttaatgaggcacgtacgaagg
gctcaccccactgtgcttttacaagattgcgacctctcctcaaatactctgactgcttct
gctgcctcatcggtaatatccccctcaaataacggaagcctggcagctagcattactact
cccgctgcacaaaataactcctcaccgtccacctcttcagcagagggctctgacatatca
tcatccaaagaagtgttaccaaaacttgaaccaaaactagaaaagggtcccaaaaacaac
actggcacagtctcatcctcacattccaacaacaaccatgaagaagcaatggatggaggt
gggtctgagcgcctcgctgcaactcctaaaaactcaagttctcgtagaagatcagctgtg
tggaagcatttctacctgtcacctgctgacagttccaaagcagtatgcatacactgcatg
aatgaatttagcaggggtaaaaatggaaaggacttgggcactagctgtctgattcgccat
atgtggagagcccacagagaaattgtcattgaagaaaatggacagggctccaacatccca
ccaccatatacaaacccaccaacgctattgtctcgctctcagctgcatcaggactcagta
gtggacattaaaaaagaatcccctttcgctccatcctccccagaaacaatatctgacaaa
gtgccccataacgaaggtgaaagcatggatgtgaaggagtctgacacaataaaccaattg
gaacaggattcctccctcaatctctgctttggacttcgagatgaggatgttcctttacct
tcctcaccgtgcgatctgtccctagagggctcaggcctgaaagaggatccggcgagttca
atcttccaacaaaacaaaaaaatcatgaaacgggtgaaatccgaagtgtggcaccatttc
atcgtctctccaggggatcagcttaaagccctctgtcgatactgcccctgtgtcatcagc
cgagggaaacggggcgacttcggaaccagctgtttgatgaggcatctaatgagaaggcac
cctgatgtcctcaaaaaccaaaaaagcacaaacgataaggactcctcacctcatccctac
gctattctctctgctgctgaggctgttccagccaaactgactaacagccctgccaaagag
aaaaagccacataactctgtgttcagtaaaaagacatcaaagttgtggaatcatttttct
atttccccttccgatcccactaaggtggtttgtttgcactgtagccgcacaataagtcgg
ggcaaaaagacgacaaacctcggaactagttgtttattcaggcacatgcagagatttcat
ggaaatgttcttgaaagtaacagtactatctcaggtgatgtgccgtctgctgaaattcac
gttaaacacgaactcatggacacttctgtgtatgacgaaaactgtgaaagatttgatgac
taccatccggttgccaaaaaaatcaccaaactcgttgccgaaatgcttgcactggatctt
cagccatcagccctagtggagaacactggtttgaaccgattactggagtaccttcaacct
caatattctctaccctcctcttcatatttcaccagcattgccataccagacatgtatgag
agggtgaaggaggttgttctcacacacctgaaagaggctgagagtggtatcgtccatttc
acaacaagcatctgggtcactagccagactcgggaatttctgactcttaccgcccactgg
gtttcatatgaatcatgtgttagacctcagggcgaggactttcactgctctgctctcctc
agtgtgtcacagatagactgtgaccatgacatgctcaatatacagaagcagctcgaatac
ttctgggacacctggatcagctccttagggctgaagaaaggatttactgtaaccgacaac
aatgccattgcaaacgtcctggaggacaacaaccatgtcatcgtgcagtgctttggacac
accatagacctaattgtgagcgaagccataaagagtcagaggatggttcagaaccttcta
agcatcgctcggaagatctgtgagcgagtgtatcgctcagacaaagcaaaggaaaagttg
gccgaactgcagaaggtttaccagttacctgaaaattgcctcatccaggacgttccctca
aaatggaggacatccttcttcatgcttgaacgtctggtggaacaaaagaaagcggtcgac
gagatgtcgatagagtgcaacttcagggaaatgatcagttgtgaccaatgggaagtgatg
cagtcggtgtgcaatgcgttgaagcccttcgaagtggcctgcagggagatgagcaatcgc
actgccagtctgggtcaagtcataccactgatacacattctcaaccgaaagatagacatg
ctcttcgatgagacgatgggcatcgacaacatgctcaagtctctgaaggaagcgatggtg
agtaggatgtcatcaaccctacgcaaccccaggtacacttgggcgacaatgttggacccg
cggtacaaggcttccttgttcacggaggaagaggcggagcaatgcaaacaagacctcatc
agtgaacttcaggtgtccctttctacctcaattgagacaaagccttcactatccaacgga
tgtggtggagaggtcccagcgtcatcaaatggctctccctcaaacaacaaggacaacctc
tgggcactcatggatgacatcagacacaagataaaacaggaggacaagccaaaatcatct
gagctggcagtactggaatacttagaggaggacatacttgatcaaagctgtgatccactg
gactattggaacctgaagaagttactgtggcctgaccttgccaaagtcgctgtccgctac
gtgggctgccctcccagcattgtcccagcagagattctgttcagcacagccagtgtgaac
tgcactctgaatcagcccatgccattactagaaaacatggaggggcttctctttctaaag
gtcaacctaccgttaatttattatcagcactga
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