Salvelinus namaycush (lake trout): 120031918
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Entry
120031918 CDS
T07522
Name
(RefSeq) protein transport protein Sec24A-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120031918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120031918
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120031918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
120031918
NCBI-ProteinID:
XP_038833707
UniProt:
A0A8U0Q0G9
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Position
Sna3:complement(47203848..47225474)
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AA seq
1109 aa
AA seq
DB search
MSSTDFSSQNGAGGPPYANGPSQNPVALQPPGPGYMAHQTPYNPMQAKGAMPPGPGLYNS
GPYQPIPPVSSNQALPGQPMLKRPPMGPQHSMTPPQSASPGPGSRMPPAHATPPPVSANN
YQHAPAWQYGGTPPMGAPPSMGAPPPMAVPPLRPVGNHITSSPSLATPQATSAEYHTTPS
VFPNATQPLGPPTSLQGYTQQGSAPLPMNPMAAPHSYQPGMRAPYGGPPPSVRPTPPTAG
PPMGNATPPLGPKTDGHMPTPGNGAQVPNSFDHLEMGPTMAGPLPPQQPGPPTRHMGLSY
PSLPPGYQNTSAPPNAATMQHPMQPSTQPYTHPQPYQQPSAGPAQLSPSLSGLSLQSQTP
EALRVVNLLQERSLLPPGPVTPPTPCLSQDLQKINCHPEVFRSTLTSIPQTQSLLNKAKL
PLGLLLHPFKDLSQLPVVTSSTIVRCRSCRTYINPFVTFLDQRRWKCNLCYRVNDVPEEF
MYNPVSRSYGEPHKRPEVQNATLEFIAPSEYMLRPPQPAVYLIVLDVSHNAVETGYLDVV
CQSLLENINALPGDSRTKIGFITFDSTIHFYNLQEGLSQPQMLVVSDIEDIFLPTPDSLL
VNLNECKELVQDLLKSLPQMFGKTMETQCALGPALQAAFKLLSATGGRVSVFQTQLPSLG
VGALKSREDPNQRTSAKDIQHLSPATDFYKKLALDCSGQQVAVDLFLLSSQYCDLASLGC
ISRYSAGSVYYYPSYHQQHNPAGVECFQKDLKRYLTRKIGFEAVMRIRCSKGLSIHTFHG
NFFVRSTDLLSLPNVNPDAGFAVQMSIEENLVDMQSVSFQAALLYTSSKGERRIRVHTMC
LPVVNSLSDIFAGADVQAITCLLASMAVDRSVTASLSDARDAMTNASIDSLTSFRTSVLT
IQQPGLLAPACLRLFPLYILALLKQKAFRTGTSTRLDDRVFAMCQLKYQPLAYVMLMIHP
ALYRVDDLTDEGALNISERTIPQPRVQQLSVEKLSRDGAFLMDAGSVIYLWIGRNCNPNF
LTQVLGLPNYAAVPLNMNMLPELDTAESQRTRAFVGWLREQRPFFPILHVIRDESPLKAS
FLQNMIEDRTESALSYYEFLLHVQQQISK
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtacagattttagctctcagaatggggcaggaggaccgccgtacgcaaatggt
ccctcacagaatccagtagcgctgcagccacccggaccaggttacatggcccaccagact
ccatacaacccaatgcaagccaagggtgctatgccgcctggccctggtctctataactcc
ggtccctaccagcccatcccaccagtcagctctaaccaggcccttccaggtcagcccatg
ttaaaaaggcctcctatgggacctcaacattccatgaccccacctcagtctgccagccct
ggcccaggctccaggatgcccccagcgcatgccacccctccacctgtgtctgctaacaac
taccagcacgccccagcctggcagtatggggggactccaccgatgggagctcctccatca
atgggggcaccgcctcctatggccgtgcctccccttaggcctgtgggtaatcacataacc
tcctcgcccagcctggcaaccccccaggccacctcggcagagtaccacacaacgccatct
gtcttccccaatgccacgcaacccctggggcctcccacctcgctccagggatacacccag
caaggctctgctcctcttccgatgaaccccatggcagctcctcactcataccagccaggt
atgagagcgccttacggcggccccccaccctctgtgagacccaccccacccactgctgga
ccccccatgggcaatgccacccctccccttggccccaagactgatggacacatgcccaca
cctggtaatggtgctcaagttcccaacagctttgatcacttggagatgggccctacaatg
gctggcccactcccgccccagcagccaggcccccctactcgacacatgggtctatcctac
ccctctctacccccggggtaccagaacacctcggcaccccctaacgccgctaccatgcaa
catcccatgcagccctcgacgcagccttacacccatcctcagccataccagcagccctct
gcaggtccagcccaactgagcccttccttgtctggtttgagtctgcagtcccagacccca
gaggccctgagggtggtcaacctgctgcaggagaggagcctgctccctccgggcccagtc
acccctcctacgccctgcctgtcccaggacctgcagaaaatcaactgccacccagaggtc
ttccgcagtaccctgaccagcatcccccagacccagtctctgttaaacaaagccaagctc
ccactcggcttgctcctccatcccttcaaagatctctcacaactgcctgtggtcacctct
agcactatagtgaggtgtcgctcctgcaggacctacatcaaccccttcgtgaccttcctg
gaccagaggagatggaagtgtaacctgtgttaccgggtcaacgacgttccagaggagttc
atgtacaacccagtcagcagatcgtatggcgagccacacaaaagacctgaggtccagaat
gccaccctcgagttcattgcaccatcagaatacatgctgagacccccccagcctgctgtt
tacctcatcgtgctggacgtatcccacaatgccgtggaaacaggatacctagatgtcgtc
tgtcagtcactgctcgagaacatcaatgcgctccctggggactcgaggacaaagattggc
ttcatcacatttgacagcaccatccacttctacaacctccaggagggcctgtcccaacca
cagatgctcgtagtctctgacatcgaagatatatttttaccaacaccagacagcctgtta
gtgaacctcaatgaatgcaaggagctggtgcaggatctgctgaagagcttgccccagatg
tttggcaagaccatggagacccagtgtgctctgggcccggccctgcaggcagcgttcaag
ctgctgtcggccaccggagggcgtgtgtccgtcttccagacccagctgcccagcctgggt
gtgggggccctcaagtccagagaggaccccaaccagaggacttctgccaaggatatccag
catctttctcctgccacagacttctataagaagctggccctggactgttcaggacagcag
gtggctgtggatctgttcctactgagctcccagtactgtgacctggcctctttaggttgc
atatccaggtactcagcgggaagtgtgtactactacccctcctaccaccagcagcacaat
ccagccggggtggagtgcttccagaaggatctcaagaggtacctcacccgcaagatcggt
ttcgaggctgtcatgaggatacgctgctctaaaggtttgtccatccacacgttccatggg
aacttctttgtgcgctccacggacctgctgtctctgcccaacgtgaacccagatgcaggc
ttcgctgtgcagatgtccattgaagagaacctggtggacatgcagtcggtctccttccag
gctgctttgctctacacgtccagcaaaggagagcgacgaatcagagtccacaccatgtgt
ttgcctgttgtcaactccctatctgacatcttcgctggggctgatgtccaggccatcact
tgtctgctggctagcatggctgtggatcgctcagtgacggccagtttgagtgacgccagg
gacgcgatgaccaacgcgtccatcgactctctgacgtccttccgcacctctgtactcacc
atccagcagcctggcctcctggcccccgcttgcctcagactgttccccctctacatcctc
gccctgctcaaacagaaagccttccgaacgggtacaagcaccaggctggacgaccgtgtg
tttgccatgtgtcagctgaagtaccagcccctggcctacgtcatgctgatgatccaccca
gcgctgtaccgcgtggacgatctgactgatgagggagccctgaacatcagtgagcgcacc
atcccccagcccagagtccagcagttgtctgtggagaagctgagcagagatggggccttc
cttatggacgctggctcggtgatctatctctggattggaagaaactgcaaccccaacttc
ctcactcaagtcctggggctcccaaactacgctgctgtgcctctgaacatgaacatgctc
ccagagttggacactgcagagtcccagagaaccagagcgttcgttggctggctgagggaa
cagaggcccttcttccccatcctgcatgtcatcagggatgagagcccactgaaagccagc
ttcttgcagaacatgatagaggatcggaccgagtcggccttgtcttactatgagttttta
ctccacgtccaacagcaaatctccaagtaa
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