Salvelinus namaycush (lake trout): 120031938
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Entry
120031938 CDS
T07522
Name
(RefSeq) nuclear transcription factor Y subunit beta-like isoform X1
KO
K08065
nuclear transcription Y subunit beta
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120031938
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120031938
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
TFIID-18kDa
PAN_3
CENP-X
Motif
Other DBs
NCBI-GeneID:
120031938
NCBI-ProteinID:
XP_038833726
UniProt:
A0A8U0PX59
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All DBs
Position
Sna38:complement(20349294..20352223)
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AA seq
208 aa
AA seq
DB search
MEEDRSTTDASQLTLGISGEYMSGGYVLQSQDDDGEESLNDHDDGGMKENFREQDIYLPI
ANVARIMKNGIPQTGKVTMIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDI
LFAMSTLGFDMYVEPLKLYLQKFREAMKGEKGIPGVSVGEGLGEELTDDSFTNQMPAGII
TADGQQQNVMVYTTSYQQIPGVQQIQFS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaccgttccaccaccgacgcctcccagctaacgttaggcatatctggcgaa
tacatgtcaggaggatatgtactccagtctcaagatgatgatggagaggagagtctgaac
gaccatgatgacgggggcatgaaagagaatttccgggagcaggacatctacctccccatc
gctaacgtggcacgcatcatgaagaacggcatcccacagaccgggaaggtaaccatgata
gcgaaagacgccaaggagtgtgtgcaggagtgtgtgagcgagttcatcagcttcatcacg
tcggaggccagtgagcgctgccaccaggagaaaaggaagaccatcaacggagaggacatc
ctgtttgccatgtcaaccctgggcttcgacatgtacgtggagcccctcaaactctacctg
cagaagttcagagaggcgatgaagggggagaagggaatcccaggtgtgtcggtgggagaa
ggcctgggggaggagcttacagacgacagcttcacgaatcaaatgccagccggaataata
acagccgacggccaacagcagaacgtcatggtgtacaccacctcatatcaacagattcct
ggcgtgcagcagatccagttctcatga
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