Salvelinus namaycush (lake trout): 120031949
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Entry
120031949 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai-like
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120031949
04131 Membrane trafficking [BR:
snh04131
]
120031949
04121 Ubiquitin system [BR:
snh04121
]
120031949
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120031949
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
120031949
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
120031949
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120031949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-RING_UBOX
zf-RING_5
P53_TAD
zf-C3HC4_3
DZR
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
120031949
NCBI-ProteinID:
XP_038833743
UniProt:
A0A8U0PYM8
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All DBs
Position
Sna38:complement(19872500..19876033)
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AA seq
487 aa
AA seq
DB search
MDQSDNDLQGTDGSGSLGGPDVRRRIPIKLISKPTIRSKPATRTQRPMGRQPSKPQAGDE
ESFSFKQEERFDCGTKAGDVFASQRRFPQQMFWDFKLNLIGEKDDIPAHFCDKCGLPIRI
YGRMIPCKHVFCYECALLHEKKGDKMCPGMQLFSCTDPVQRIEQCLRGSLYMCSIVKGCK
RTYLSQRDLQAHINHRHMRAAKALASRQDALHLPPSTEVPDRFRVPPPHLPKTQGHLPPP
LQHGGHDPYGQPPPASHDAPPLSQETFRIATVTTRARSNLITVPIQDDSGSSSTSSSRDP
LPPGPGPAPPPHHHPGDYPGQPVVSHPHHMMAPPQQHYGPPPPPPPPINHPMQHQPQGSG
TPHMVYNQAGPPPPMSNAPPPITPPPGHIMGQMPPYMNHPPPGPPPQHGGPPVNAPPPHH
YNPNSMQQFPEDQGTLSPPFNQQGGLSPGMWPAPRGPPPPRMQGPPPQGQMPGPHHPDQS
RYRPYYQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaagtgacaatgacctgcaaggcacggacggctcggggagtcttgggggccct
gatgtccgcagacgcatccccatcaaactcatctccaaaccaaccatcaggagcaaacct
gctacccggacacaaagacccatgggcaggcagccctccaaaccccaggctggggatgaa
gagagttttagcttcaagcaagaggagaggttcgactgtggtaccaaggctggggatgtg
tttgcaagtcaacggaggttcccccagcaaatgttttgggactttaagttgaatttgata
ggtgaaaaggatgacattccagcacacttttgtgacaagtgtggtctgcccataaggatc
tatggacgcatgattccatgcaagcatgtgttctgttatgagtgtgcgttgctccacgag
aagaagggagacaagatgtgcccaggtatgcagctcttcagctgcacagacccggtccag
cgcatcgaacagtgtctgcggggctccctctacatgtgcagcattgtgaagggctgcaag
cgcacctacctttcccagcgtgacctgcaagcccacatcaaccaccgccacatgagggca
gccaaggctttggcaagccgccaggacgccttgcaccttcccccatccacagaggtccct
gaccgcttccgtgtgcccccgcctcacctgcccaagacccaagggcacctcccgccccct
ctccaacacgggggtcatgacccctacggtcagccaccaccggcttcccatgatgcacct
cctctttcccaggagaccttccgcattgccaccgtaactacacgcgcacgcagcaacctc
atcaccgtgccaatccaggatgactccggttcttcctccacctcttcctcccgtgaccct
ctccctcctggcccgggccctgctccacccccacaccaccaccctggggactaccctggt
cagcctgtagtgtcccacccacaccacatgatggcaccaccgcaacagcactacggccct
ccacctcctccccctccacccatcaaccaccccatgcagcaccagccccagggctctggg
acaccccacatggtctacaaccaggctggccctcccccgcctatgtctaacgcaccccct
cccattacccccccgccaggacacatcatgggtcagatgcctccctacatgaaccaccct
cctccaggccccccacctcaacacggtggtcctccagtcaacgccccccctccccaccac
tacaaccctaactccatgcagcagttccctgaggaccagggcacactcagtccccctttt
aaccagcaagggggtctgagccctgggatgtggcctgcccctagagggcctcctcctcca
aggatgcagggccccccacctcagggccagatgcctggaccccatcaccccgatcagtcc
cgctaccgcccttattatcagtaa
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