KEGG   Salvelinus namaycush (lake trout): 120031972
Entry
120031972         CDS       T07522                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04510  Focal adhesion
snh04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120031972
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120031972
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C OVT1
Other DBs
NCBI-GeneID: 120031972
NCBI-ProteinID: XP_038833791
UniProt: A0A8U0TZS3
LinkDB
Position
Sna38:3809156..3843839
AA seq 1781 aa
MLILHIASLLTLWCRSFAQLPEFGDVCPEGSCYPATGDLLIGRAHQLTASSTCGIEKPER
FCIVGHLEEEKKCFVCDSREMYDERLNHTTSHSIENLVTTFAPNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPATMVIERSMDFGKKWQVYRYYSYNCESAFPGISVGPM
VKVDDIICDSRYSDIEPSAEGEVIFRVLDPAFEIEDPYSPRIQNMLKITNLRVQFSKLNT
LGDNLLDSRDEVTEKYYYALFDMVVRGNCFCYGHASKCSPVDGIHVGTEGMVHGHCMCNH
NTEGLNCEHCKDFYNDLPWRPAEGHNTNACKMCECNHHSRSCHFDMAVYLSTGNVSGGVC
DECQHETMGRQCEQCRPFYYQHPERHLRDPNICEPCSCDPAGSLQGGVCDGRTDVSAGLI
AGQCRCKTSVEGERCDHCRQGHYGLGQGPNGCLQCTCNPLGTLPGGSPCDMDTGNCFCKR
LITGRNCDQCLPHHWGLSNDMDGCRPCDCDQGGAVNNDCSPISGQCQCREHMYGRRCDQV
ESGYYFIALDHYTYEAEDAKHGPGVKVVPRPYPLNRSPTWTGPGFVNVPEGAHLEFHINN
LPDSMDYDVLIRYEPQLPEQWEQVEIRVIRPYSMRVGQPASPCENTLPGGDQQLVSLPPG
SRHVVLPRPVCLDKGRNYTLRLSLPLYSSLSDVQSPYTLIDSLVLIPRVRELELFEGSQG
EEAWDTFQRYRCLESSQSVIKSPMTDICNDYIFSVSALLHQGAMACQCDAQGSLSAVCDP
RGGQCRCRPNMAGRNCDRCAPATFLFSPSGCRPCECNPVGSVNAFCHEATGQCECVPGAS
GRQCAHCLPGYWGFPQCRPCQCNGNSDYCHHQTGECQGCRAFTTGHMCERCLDGYHGDPV
LGLGGHCRPCMCPDGPGSGRQYANGCYQTANNYRLVCVCSPGYRGARCDECAPGHYGNPQ
VPTGRCLPCQCNDNIDQLDSGSCDARTGVCLKCLHHTEGYGCQRCKLGYYGNAATQSCRR
CMCGSVGTTSEACPSPGECHCDLQTGQCPCRPNVIGQNCDRCAPDTFNIGSRQGCQTCDC
DQTHSFGTSCNELSGQCSCRPGFGGRKCNECRDKFWGDPEVKCQACDCDLRGIASEQCHR
SSGQCVCVEGVSGPRCNQCARGYHGEFPACQRCHQCFGEWDGVVGELTNQTQRLKDHVTE
LQTNGVTAPYTDTVSSLEMSANAISGIVENNPAIQKMEDVQQMMQQVTEMVADLNERLNV
SEDSLSRLVVNANYTEASLDTLREQARELERTVKDIGDHIKAVKNSNIEGAMDTITDAHL
ESKRAEIRVNQTTSYPDNTLEQSATLRREAEARLSQNQAEFDLRQQKHTERLERLTMELD
TLDLSELSKQTCGAAGGEEGCAASPCGGVGCVSEDGTHRCGGDGCDGLVTQTQSTLKTAK
DFDQEILSTMQEVDKLSRMVWEVKVHADEAKLSAREVLLKSNQSRDRVEHTNEQLRSLIK
EIRDLLTNDRANVEVIEAVSNEVLALKMPTSPGQLEALTKEIRDRVGTLTSVEDILSQSA
NDIHTAERLLEQARTASQEASEVKETAALVKEALDTTERAQNSAINAVKQVYNNTRGTLD
LITSVESETAESELRLSNATLRLLQLERDVTLLRERSLVTSHRTQSTERLSETAGQDAEQ
ALQEFDSEVKGQYSVVEGLVVTKAEGVSDAKKRAELLQQEAKELLTQTSGKLQRLRELER
SYAANQRTLEAKAGQLAGLEKTARQLLDDISQKVMVYSTCS
NT seq 5346 nt   +upstreamnt  +downstreamnt
atgttgatattgcacatcgcatcacttttgaccctctggtgtcggtcctttgcgcagctg
ccggagtttggggatgtgtgccctgaggggagctgctaccccgccaccggggaccttctg
atcggccgtgcgcaccagctcaccgcctcctccacctgcggcattgagaagcctgaacgc
ttttgcattgttggtcacctggaggaggagaagaagtgttttgtgtgtgactccagggag
atgtatgatgagaggctgaaccacacgaccagccacagcatcgaaaacttggtcaccacc
tttgcccccaaccgcctcaagacctggtggcagtctgagaatggtgtggagaatgtgacc
attcaactgaacctggaagctgagttccacttcacacatctcatcatgacctttaagaca
ttccgtccggctaccatggtgatcgagcgttccatggattttgggaagaagtggcaggtg
taccgttactatagctacaactgtgagtccgccttccctgggatatccgtgggacccatg
gtcaaagtggacgacatcatctgtgattcccgctactctgacatagagccatccgcagag
ggagaggtgatattcagggtgctggacccagcatttgagattgaagacccttacagtccc
aggatacagaacatgctgaagatcactaacctgcgtgtccagtttagtaagctcaacaca
ctgggtgacaacctgctggactccagagacgaggtcacagagaaatactattatgccctc
ttcgacatggtcgtccgcggcaactgcttctgctacggacatgcctccaagtgttcccct
gtcgatgggatacatgtaggcacagagggcatggtccatggtcactgtatgtgtaaccac
aacacagagggtctgaactgtgagcactgtaaggacttctacaacgacctgccctggagg
cctgcagagggacacaacaccaatgcctgcaagatgtgcgagtgtaaccaccactccagg
tcatgtcactttgacatggctgtgtatctgtctacggggaacgtgagtggaggagtgtgt
gatgagtgtcaacacgagaccatggggcgtcagtgtgagcagtgcagacccttctactac
cagcaccccgaaagacacctgagagaccccaacatctgcgaaccgtgtagctgtgacccg
gcgggctcccttcagggtggtgtgtgtgacggcaggacagacgtgtctgctggtctgata
gcaggacagtgtcgctgtaagaccagtgtggagggagagcgctgcgaccactgtagacag
ggacactacggcctggggcagggaccaaacggctgcttgcagtgtacctgtaaccctctg
ggcacgctgcctggaggaagcccatgtgacatggacacaggaaactgcttctgcaaacgc
ctcatcaccggcaggaactgtgaccagtgtctgccgcatcactgggggctgagtaatgac
atggacggctgcagaccatgtgactgcgaccagggcggagccgtcaacaatgattgttct
ccgatatcaggccagtgtcagtgtcgagaacacatgtatgggaggcgttgtgaccaggtg
gagtcaggatactacttcatcgccctggaccactacacctacgaggctgaggacgccaag
cacggccctggtgtgaaggtggttcccaggccctatcctctgaaccgtagtcctacctgg
acagggccagggtttgtcaacgtacccgagggagcccacctggagttccacatcaacaac
ctacctgactccatggactacgacgtgctgatccgctatgaaccacagttgccggagcag
tgggagcaggtggagatcagagtgatacgtccgtactcaatgagagtggggcagccagcc
agtccatgtgaaaacactctaccaggaggagatcagcagttggtgtctcttcctccagga
tccagacatgtggtgctcccgaggcctgtgtgtctggacaagggacggaactacaccctg
cgtctcagtctgcctctctactcctctctcagtgacgtccaaagcccctacacactcatc
gactccttggtgttgattccgcgggtgcgtgagctggagttgtttgagggttctcagggc
gaggaggcgtgggatacgttccagaggtaccgctgtctggagagcagccagagcgtcatc
aagagccccatgacggacatctgcaacgactacatcttcagtgtgtctgccctgctacac
cagggggctatggcgtgccagtgtgacgcccagggctcgctcagtgcggtgtgcgacccc
agaggtgggcagtgccggtgtcggcccaacatggcgggcaggaactgtgaccgctgtgcc
cccgccaccttcctgttcagcccctcaggatgcagaccctgtgagtgtaatcctgtgggt
tctgtgaacgctttctgccacgaggccacaggtcagtgtgagtgtgtgccaggggcatca
ggacgtcagtgtgcccactgcctgccaggctactggggcttccctcaatgccggccctgc
cagtgcaacggcaacagcgactactgccaccatcagactggagagtgccagggctgccgc
gccttcaccaccgggcacatgtgtgaaaggtgtctggatggttaccatggtgacccagtg
ttgggtttggggggtcactgccgcccctgcatgtgtccagatgggccggggagcggacgc
cagtatgcaaacggctgctaccagaccgccaacaactaccggctggtctgtgtctgcagc
cctggatacagaggagccaggtgtgacgagtgtgcgccaggtcactatggtaacccccag
gtgcccaccgggcgctgtctgccctgccagtgtaacgacaacatcgaccagctggactcg
gggtcctgcgacgctcgcacaggcgtctgcctcaaatgcctgcaccataccgagggctat
ggctgccagcgctgcaagctgggttactacggcaacgccgccacccagagttgcaggagg
tgtatgtgtggttcagtgggcacgacgtcggaggcatgtccgtccccgggggagtgtcac
tgtgacctgcagactggccagtgtccctgccggcctaacgtgattggccagaactgtgac
cgctgtgcccctgatacgttcaacataggaagcagacagggctgtcagacctgtgactgt
gaccaaacccactcctttgggacgtcgtgcaatgagctgtcggggcagtgctcgtgcagg
ccaggtttcgggggaagaaaatgcaatgaatgccgagataagttctggggagatcccgag
gtcaaatgtcaagcgtgtgactgtgacctgcgtggcatcgccagcgagcagtgccaccgt
tcgtccggccagtgtgtgtgtgtggagggtgtgtctggaccccggtgtaaccagtgtgcc
agagggtaccatggggagttccccgcctgccaacgatgccaccagtgcttcggcgagtgg
gacggcgtggtaggggaactgaccaaccagacgcagcgtttgaaggatcatgtgacagag
ctccagaccaacggggtgacggcgccatacacagacaccgttagcagtctggagatgagt
gctaatgctatcagtgggatagtagagaacaaccctgctatacagaagatggaagatgta
caacagatgatgcagcaggtcactgagatggtggcagacctgaacgagaggctgaacgtc
tcagaggattccctgtcccgtctcgttgtaaatgccaactacaccgaggccagtctggac
acactgagagagcaggcccgagagctagagagaacagtcaaagacattggagaccacata
aaggctgtgaagaactctaacatagagggagcgatggacaccatcaccgatgcccacttg
gagtctaagagggcggagatccgtgtcaatcagaccaccagttaccccgacaacactttg
gaacagtcggctacactacggcgcgaagcggaggccagactgagccagaaccaggcggag
tttgacctgagacaacagaaacacacagagagactggagaggcttaccatggagctggac
actcttgacctatcagagctcagcaagcagacatgtggagcggctggtggggaggagggg
tgtgctgcgtcaccctgtggaggggtggggtgtgtgtcggaggacggcacccatcgctgt
ggtggagacgggtgtgacggtctggtcacacagacacaaagcactctgaaaacagccaag
gacttcgaccaggaaatcctgtccaccatgcaggaagtagataagctctctagaatggtg
tgggaagtgaaggtgcatgcggacgaggccaagctgagtgctcgggaggtgctgctgaag
tccaaccagagccgagatagagtggagcacaccaacgagcagctccgcagcctcatcaag
gagatacgagacctactcactaacgaccgtgccaacgtggaggtaatcgaagcggtgtcg
aacgaggtgttggccctgaagatgcccacgtcgcccgggcagctggaggctctgaccaag
gagattagagacagggtgggaaccctcaccagcgtggaggacatcctcagtcagagtgcc
aacgacatacacactgcagagaggctgctggagcaggctcgcaccgccagtcaggaggcg
tctgaggtgaaggagacagctgccctggtgaaggaggctctggatacaactgagcgtgct
cagaattctgccatcaatgccgtcaagcaggtctacaacaacaccaggggaacacttgac
ctcatcacgtctgtggagtcggagacggcggagtcagagttgcgtctgagtaacgccaca
ctgcgtctgctgcagctggagagagacgtgactctgctgagagagagaagcctagtcacc
agccaccgcacacagagcactgagagactgtctgagaccgccgggcaggacgcagagcag
gccctgcaggagtttgactcggaggtgaagggtcagtacagtgttgtggagggcttggtg
gtgacgaaggcagagggcgtgtctgacgccaagaagagggcggagctactccagcaggag
gccaaggagctgctcacccagacaagcggaaaactacagagactcagagagttggagagg
tcatatgcagccaaccagcgtactctagaggccaaggcaggtcagctggccgggctggag
aaaacggcacgccagctgcttgatgacatcagccagaaagtcatggtctacagcacctgt
tcttag

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