Salvelinus namaycush (lake trout): 120031982
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Entry
120031982 CDS
T07522
Name
(RefSeq) transcription termination factor 1-like
KO
K15225
transcription termination factor 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120031982
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
120031982
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
Nckap1
Motif
Other DBs
NCBI-GeneID:
120031982
NCBI-ProteinID:
XP_038833802
UniProt:
A0A8U0TZV2
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Position
Sna38:20033759..20039601
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AA seq
739 aa
AA seq
DB search
MLGTSTSTKQEASENSMLLEMSRVSPLLFEETPELISSVAPDTVEGCKKKKKKKKKKTKA
LSEQGPEEPAIEHNQKDCHQLTEPKHKEQTVTELEVVEKGRKKLKKGKQKKQLNVVQDEM
GVPDPEEQTSGKTKKKSKNLQTQQVGAEGVTADEKNMNSRKKKRKHNDIEPEWGIDCVLS
KSAVDVSAVTAPDEARKSKKKHKNRQTELEEGAESRQTVSTTAEDPEIIELHTETVKRGE
SMLTEAEENVKEKRKRKKKKHRESELNDCPDKADLPGIKEQTERKLKSKRLKTDGGSTAV
EGSGRKKKRSRASDKGMDSVHSAEGVLDLAVPNDNRTHDAGTNSETEGAHSVMVETGTQH
NKPSLKEETLSVDDWQTLNDLKEFIPNVESKSVAEIHKMIKYDLDRFREFRRQGLSLRSG
KFSTQENERIKSNVYDFLALTGIQSGSKLFHPRRFKEEEANIKQLKRQHRFHEIIGEGIP
RPWHQVYIRGRKIFDASNYKGRFTEEELHSLKKLQTLHGNKWATISELTGRSESALEKRF
AQMSANRGAWTEEELKRLMEAVRKHLVGQAEPGSGPATVRKDKLYNNIPWADVCQAVETR
HCSQCRIKWLAVLKHKMAYGQPVFSGGTTSLQGKVDLIKALNAKQIEDAADIDWEEIAYS
IGNVTPRYIQTHYYRLKVANVPLWQSMSFCEIIDFLNSRVLPNFEEQLQALIKSGEMVSR
NDPQELFLLSEIFDNEDSA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgctggggacttcaacatccaccaaacaagaggcaagtgagaattccatgttgcttgag
atgtctcgagtatcccctcttctatttgaagaaactcctgaattaatctcatcagtggca
cctgatacagtcgagggatgcaaaaagaagaagaagaagaagaagaaaaagactaaagca
ctctctgaacagggaccagaagaaccggcaatcgagcataatcaaaaggattgtcaccag
ttgacagaacctaaacataaagagcaaacagtgaccgagctggaagtggtggagaaaggg
aggaagaaactcaaaaaaggaaagcaaaagaagcagctaaatgttgttcaagatgaaatg
ggggtaccagatcctgaggaacaaactagtgggaaaacaaagaaaaagtcaaagaatctt
caaacacaacaggtgggagcggagggagtgactgctgatgagaagaatatgaatagccgg
aagaaaaagagaaaacataatgacattgagccagaatgggggatagactgtgtcctctca
aagtctgcagtagatgtttcagctgtaactgcaccagatgaggccagaaagagtaagaag
aagcacaagaacagacaaacagaacttgaagagggagcggaaagccgtcagacagtttca
acaacagcagaggatccagaaatcatagaactgcacactgaaacagtcaagagaggtgaa
agtatgttaactgaggcagaggagaatgtaaaagagaagaggaaacgaaagaagaaaaaa
cacagagagagtgaactgaatgattgtccagataaagcagaccttccaggtataaaagaa
caaactgaaagaaaattgaagtcaaagaggttgaaaacagatggagggtctacagctgtg
gagggcagcgggagaaagaaaaaacgcagcagagcgtcagacaagggaatggacagtgtc
cactctgcagaaggtgttttggatttagctgttccaaatgacaacaggactcatgatgct
ggaacaaacagtgagacagagggtgcccattcagtcatggttgagacagggactcaacac
aacaaacccagcctaaaggaagaaactctaagtgtggacgactggcagactctgaatgat
ctgaaagagttcattcccaatgttgagtcaaagtcggttgccgagatccataagatgata
aagtatgatcttgatcgattcagggaattccgaagacaaggcctttccctgcgaagtgga
aaattcagtacgcaggagaacgaacgaatcaagagtaacgtctacgacttcctggctctc
actgggattcagagtggctctaagctcttccatccacggcgcttcaaagaggaagaagca
aatatcaagcaattgaagaggcagcacagattccatgaaataataggtgaaggaataccc
aggccttggcatcaagtctatatacgtgggaggaaaatatttgatgccagcaactacaag
ggcaggttcaccgaagaagaacttcactctttgaaaaaactgcagacgttgcacggcaac
aagtgggcgacgatctcggagttgactggccgaagcgaatcggccctagagaaacgtttc
gctcaaatgtctgcaaacagaggtgcgtggaccgaggaagaactgaaaagactaatggaa
gctgtgcggaagcacctggtgggacaggcagagcctggcagtggaccagccactgtcagg
aaagacaaactgtacaacaacatcccctgggcagatgtgtgccaggcggttgaaacgcgc
cactgttcccagtgtcgaataaaatggttggctgttttgaagcacaaaatggcatatgga
caaccagtattcagtggcggcacaacatccttacaaggcaaagtggatttgatcaaagcg
ttgaatgcaaagcagatagaagatgctgcagatatcgactgggaagaaattgcttactca
attgggaatgtcacgccgcgctacattcagacacactactacaggctaaaggtagccaac
gttccgttgtggcagagcatgtccttctgtgagatcatcgacttcctcaacagtagagtt
ctccccaattttgaagagcaactccaagctctgataaaatcaggagagatggtgtcaaga
aacgatcctcaagagctcttcctcctctctgagatctttgataatgaggacagcgcctaa
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