Salvelinus namaycush (lake trout): 120032038
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Entry
120032038 CDS
T07522
Name
(RefSeq) PDZ and LIM domain protein 4-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120032038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120032038
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120032038
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
SNAPC3
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
120032038
NCBI-ProteinID:
XP_038833888
UniProt:
A0A8U0PZV7
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Position
Sna3:complement(48572678..48636964)
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AA seq
380 aa
AA seq
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MPHTVTLNGPSPWGFRLVGGRDFSTPLTISRVTPGSKAAQGDLCPGDTILVINGDSTETM
THMEAQNRIKACMGELTLAIIRSGDKVWSPNVIEDGKTSPYMATLETESPQNFRPISTGP
MTSGYTSGYSSSYSRGNNSSGYSRKPSYTPELPHLNNGTSKQSNHAQYNNPASMYAHNNG
SNGDRDRVLPKQMGGLSLSSPHSPEPPMRSPMGRNGNGHSFEVTTESDVYKMLQDTEEPV
SAPKQSGSFKYLQGILEAEDGGVSPTDMSGVRGLRSPDRSPVPKLGSPIPGHMGPMPGLQ
KLPQCTRCGNGIVGTIVKARDKLYHTECFMCDDCGMNLKQRGYFFIEENLYCETHAMARV
QPPEGYDVVAVYPNSKVELV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgccccacaccgtgacattgaatggaccctcaccttggggttttcgactggtcggtgga
agagacttcagtacaccgttaactatttcgagggtgacaccgggcagtaaggcagcacag
ggggacctgtgtcctggagacaccatcctggtcatcaatggggacagcacagagaccatg
acacacatggaggcccagaacaggatcaaggcctgcatgggggagctcacactggccata
atcaggtcaggagacaaagtctggtctccaaatgttattgaagatggcaagacaagtcca
tacatggctacattggagactgagtcaccacagaatttccgacccattagcactggacca
atgaccagtggttacaccagtggttacagcagcagctacagcagggggaataacagcagc
ggttacagccgaaaaccctcctacactcccgagctgccgcatctcaacaacggcacctcc
aagcagtccaaccacgcgcagtacaacaacccagccagcatgtacgcacacaacaacggc
agcaacggagacagagacagggtcttgccaaaacaaatgggcggcctgagcctgagttcc
cctcacagccctgagcctccgatgcgttctccaatgggccgtaatggaaacggtcatagt
tttgaagtcaccacagagtcagatgtgtacaagatgctgcaagacacagaggagccagtc
tccgcacccaaacaatccggctccttcaaatacctacaaggcatattggaggcagaggat
ggaggtgtgtcccccactgacatgtctggagtgagaggccttaggtccccggaccgatcc
ccagtccctaaactgggcagccccatccccggccacatgggccccatgcccggcctacag
aaactcccccagtgcacgcgctgtggcaacggcatagtgggaaccatcgtgaaggccaga
gacaaactgtaccacacagagtgcttcatgtgtgatgactgcggtatgaacctcaagcag
aggggctacttcttcatcgaggagaacttgtactgtgagacccacgccatggcccgcgta
cagcctccggagggatatgacgtggtcgccgtctaccccaactccaaggttgaactggtc
tga
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