KEGG   Salvelinus namaycush (lake trout): 120032310
Entry
120032310         CDS       T07522                                 
Name
(RefSeq) transportin-3 isoform X1
  KO
K15436  transportin-3
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03013  Nucleocytoplasmic transport
snh03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120032310
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120032310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:snh03016]
    120032310
Transfer RNA biogenesis [BR:snh03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    120032310
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N
Other DBs
NCBI-GeneID: 120032310
NCBI-ProteinID: XP_038834269
UniProt: A0A8U0U0A2
LinkDB
Position
Sna38:3283969..3301106
AA seq 921 aa
MEKPTVALVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEMADQLLQLKQDVESCYF
AAQTMKMKIQMSFFELPPETHIALRDSLLSHIQSLKDLSPIIVTQLALAIADLALQMASW
KGCVHTLIEKYSNDVSSMTFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTVVT
LLMTCVEKSGSNEKMLIKVFRCLGSWFNLGVLDSNFMANNQLLMVLFQVLQRDETSTNLH
EAASDCVCSALYAIENVDTHMPLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTEL
CETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGENLYKTNDPALH
GIFRPYIQRLLHGLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECFSQ
LYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLTEVLEQVVLLPETVHIAVRYTSI
ELVGEMSEVVDRNPRFLDPVLNYLMKGLREKTLASVAAKAIHNICSVCRDHMAQHFQGLL
DIARALDSFALTTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLLSQDPGN
GKAADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADNRIVERC
CRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQGLL
DMLQALCMPTFQLLEQTNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSGIIVHIIQCAIA
ATTLDHRDANCSVMKFVRDLIHTGVSNDHEDDFELRKQLIGQAMGQHGQQLVTQLMHTCC
FCLPPYTLPDVAEVLWEIMVFDRPTFCRWLENALKGLPKETSGGAVTVTHKQLTDFHKQV
TSAEECKQVCWAIREFTRLFR
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggagaaaccgacagtcgcacttgtgtatcaagctgttcaggctctttatcatgatccg
gaccccgccggcaaagagcgagcctctgtgtggctgggggagctacagagatcgatgtat
gcgtgggagatggcagaccagctcctccagctgaaacaggacgtggaatcttgttacttt
gccgcccagaccatgaagatgaagatccagatgtcgttctttgagctccccccagagacc
catatcgccctccgagactccctgctctcacacatacagagcctcaaagacctctccccc
atcatcgtcacccagctcgctctggccattgcagacctcgccctacagatggcctcctgg
aagggctgtgtccacaccctcattgaaaagtatagcaatgacgtcagctccatgacgttt
ctgatagagatccttacagtgctccccgaggaggtccacagccgctccctacgcatcgga
gccaatcgcaggacagagatcatcgaggacctggcctattactccagtactgtggtcacc
ctactgatgacgtgtgtggagaagtctggcagcaatgagaaaatgctgatcaaggtgttc
cgctgtctgggcagctggttcaacctgggagtcctggacagcaacttcatggccaacaac
cagcttctcatggtccttttccaagtactgcagagagacgagacgtccactaacctgcac
gaggccgcatctgactgcgtgtgttcagcgctgtacgccatcgagaacgtggacacgcac
atgcccctggccctgcagctcttccagggcgtcctcacgctggagacagcctaccacatg
gccgtggcacgggaggacctcgacaaagtgttgaattactgtaggatcttcactgagttg
tgtgagacgtttctggagacgacagtcaggagtccaggccagggcatgggagacctgcgg
acacttgagctactgctcatctgtgcaggacaccctcaatatgaggtcgtggagatctcc
tttaacttctggtatcgtctgggagagaacctgtataagaccaacgaccctgccctccac
ggcatcttcagaccctatatccagagactgctgcacggcctggcccgccactgccaacta
gaccccgaccacgagggcatcccagaagacactgatgactttggggagttcaggatgagg
gtgtctgatcttgtgaaggatgtcattttccttgtgggctccatggaatgtttctcccag
ttgtactctactctaaaagaagggaaccctccctgggaggtgaccgaggctgttctcttc
atcatggccgccatcgccaagagtgtagaccctgagaacaaccccactctgacagaggtg
ttggagcaggtggtgctgctgccagagactgtccatatcgccgtgcgctacaccagcatt
gagctggtgggggagatgagcgaagtcgttgaccgcaacccgcggttcctagaccccgtg
ctgaactacctgatgaagggcctgagggagaagaccctggcttccgtggcggccaaggcc
atccataacatctgctctgtgtgtcgggaccatatggcccagcacttccagggcctgctg
gacatcgcgcgtgccctcgactccttcgccctgacgaccgaagccgccgtaggcctcctc
aaaggtacagccctggtcctggctcgcctgcccctggagaagatcgccgagtgtttgagt
gacctgtgtgctgtgcaggtcatggccctcaaaaagcttctctctcaggaccccgggaat
gggaaagctgctgaccccactgtctggctggacagactagcagtcatcttccgacacaca
aacccaatcgtagagaatggacagacacacccatgtcagaaagttatccaggagatctgg
ccggtcctatcagagactctgaacacacaccaggctgataaccgcatcgtggaacgctgc
tgtcgctgcctgcggtttgctgtgcgctgcgtgggcaagggctctgcctctctactacag
ccactcgtcacacagatggtcagtgtgtatcaggtgtatccccactcctgcttcctgtat
ctgggcagcatcctggtggatgagtacggcatggaggagggctgcagacaaggtctactg
gacatgctacaggctctttgtatgcccaccttccagctattggagcagaccaacggcctc
cgtaaccacccagacacagtagatgacctcttcagactcgccaccaggtttgtccagcgt
agtcccgtcaccctgctcagcagtggcatcatcgtccacatcatccagtgtgccatcgcg
gccaccacactggaccaccgggacgccaactgcagcgtcatgaagtttgtcagagacctc
atccacacgggcgtcagcaacgaccacgaggatgactttgagctgcggaagcagctaata
ggccaggccatggggcagcacgggcagcagttggtcacccagctcatgcacacatgctgc
ttctgcctgccgccttacacactccccgatgtggctgaggtgctctgggagatcatggtg
ttcgacaggccgacgttctgccgctggctggagaatgcgctgaaggggcttcctaaagag
acgtcaggcggggcggtgaccgtcacacacaaacagctcacagacttccacaagcaggtc
accagtgcggaggagtgtaagcaggtgtgctgggctatccgggagttcactagattgttc
cgatag

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