Salvelinus namaycush (lake trout): 120032327
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Entry
120032327 CDS
T07522
Name
(RefSeq) TBC1 domain family member 22B-like isoform X1
KO
K20360
TBC1 domain family member 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120032327
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
120032327
Retrieval pathways
120032327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
120032327
NCBI-ProteinID:
XP_038834298
UniProt:
A0A8U0PZL4
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All DBs
Position
Sna38:complement(2133609..2302754)
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AA seq
558 aa
AA seq
DB search
MSTDGNKKQFWKRNTAKVPGSIQHVYGAQHPPFDPLLHANLIKAGNKPQATPGGKPKKAT
TFQEFESITSDAWDVGDDDDELLAMAAQNLNTEVVMETANKVIENHSKQQEKQRRDDADA
SELEDREEEEARDEEVEEQGEEGEESTPEVSFACEPSPLSDGRLVKSLSEAPIGSPKDAS
LHRQQSLPHRPTIPMVARIADQNTSGNPAMTEREASRLDKFKQVLAGPNTDLEELRKLSW
SGIPRQVRPITWKLLSGYLPANTERRESTLQRKRQEYFGFIEQYYDSRNDEHHQDTYRQI
RIDIPRMSPECLMLQPMVTEIHIDIPRTNPLIPLFQQASVQEIFERILFIWAIRHPASGY
VQGINDLVTPFFVVYVFEYIKEEVENFDVSSLQEEALRNIEADSFWCMSKLLDGIQDNYT
FAQPGIQRNVKALEKLVSRIDETVHVHMQQYEVEYLQFAFRWMNNLLMRELPLRCTIRLW
DTYQAEPEGFSQFHLYVCAAFLVRWRKEILDERDFQGLMILLQNLPTMHWGNEEVSVLLA
EAYRLKFAFADAPNHYKR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgacggaaacaagaaacaattctggaaaagaaatacagctaaggtccctggc
agcatacaacatgtgtatggtgctcaacatcctcctttcgaccctcttctgcatgctaat
ctaatcaaagcgggcaacaagccccaggcgactccgggagggaagccaaagaaagccacc
accttccaggagtttgagagcatcaccagcgatgcctgggacgtgggggacgacgacgac
gagctgctcgccatggccgcacagaacctcaacaccgaggtcgtcatggagaccgccaac
aaggtgatcgagaaccacagcaagcagcaggagaagcagagacgggacgatgccgacgcg
tcagagctggaggaccgagaggaagaggaggcgcgtgatgaagaggtggaagagcagggg
gaggaaggggaggaatcgacccctgaggtgtcgtttgcttgtgagcccagcccgctcagt
gatggcagactggtgaagtcactgagtgaggcccccatcggatcacctaaggatgcgtcg
ctccacagacagcagtccctgccccaccggcccaccatccccatggtggctcgtatagct
gaccagaacacctccgggaacccagccatgacagagagagaggcatcccgcctggacaag
tttaaacaggtcctggctggacccaacactgaccttgaggaattacgaaagttgagctgg
tctggaattccgcgccaggttcgtccaatcacgtggaagctcctttcgggttaccttcct
gccaacacagagaggagagagagcacgctacagaggaagagacaggaatactttggtttc
atagaacagtactacgactcgcgcaacgacgagcaccaccaagacacatacagacagatt
cgtatagacatcccccggatgagtccggagtgtctaatgctgcagcctatggtgaccgag
attcacattgacataccgagaactaatccccttattcctctctttcaacaagcttctgtc
caagagatctttgagcgtatcctgttcatctgggctatccgccacccggccagcggctac
gtgcagggcatcaacgacctcgtcacgcctttcttcgttgtctacgtctttgagtacatc
aaggaggaggtggagaattttgacgtgtccagcttgcaggaggaggctttgcgaaacatc
gaggcagacagtttctggtgcatgagcaaattgttggacggcattcaggacaactacaca
tttgcccagccggggatccaaaggaatgtcaaggctctggagaagttggtcagcaggatc
gatgaaacggtgcacgtccacatgcagcagtatgaagtggagtacctccagtttgccttc
cgttggatgaacaacctgctgatgagagagctgccgttacgctgcactatacgcctctgg
gacacctaccaggctgaacctgagggattctctcagttccacctctacgtgtgtgctgct
ttcctggtgcgatggaggaaagagattctggacgagagagatttccagggtctgatgatt
ctgctgcagaacctaccaaccatgcactggggcaacgaggaggtcagtgtgctcctggct
gaagcctacaggctgaagtttgccttcgctgatgcccccaaccactacaagagatga
DBGET
integrated database retrieval system
