Salvelinus namaycush (lake trout): 120032359
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Entry
120032359 CDS
T07522
Name
(RefSeq) protein transport protein Sec23A
KO
K14006
protein transport protein SEC23
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120032359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120032359
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120032359
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
APP_E2
Motif
Other DBs
NCBI-GeneID:
120032359
NCBI-ProteinID:
XP_038834329
UniProt:
A0A8U0U0C1
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Position
Sna39:complement(8875147..8888408)
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AA seq
766 aa
AA seq
DB search
MATYQEFIQQNEDRDGVRFSWNLWPSSRLEATRLVVPVSCLFTPLKERPDLPPVQYEPVL
CSRANCKAVLNPLCQVDYRAKIWACNFCFQRNPFPPSYAGISDVNQPAELMPQFSTIEYI
VQRGPPTPLIFLYVVDTCLEEEDLQALKESLQMSLSLLPPNALVGLITFGRMVQVHELSC
EGIAKSYVFRGTKELSSKQIQEMLGLTNPAASGPQGRPVAPQDPAVTCRFLQPVHKVDMN
LTDLLGELQRDPWPVPQGKRPLRSTGIALSIAVGLLEGTFPNTGARVMMFMGGPPTQGPG
MVVGDELKTPIRSWHDITKDNARHLKKATKYYEALANRVAVNGHSIDIYACALDQTGLLE
MKCLSNLTGGHIAMGDSFNTSLFKQTFQRVFSKDYNGEFRMAFGGTLEVKTSRELKVSGA
IGPCVSLSAKGPCISENEVGVGGTTQWKICSLSPSTTLALYFEVVNQHNAPIPQGGRGAV
QFVTQYQHSNTQRRIRVTTVARNWADAQSQIQHIESSFDQEASAVIMARLGVFRAESEEG
PDVLRWLDRQLIRLCQKFGQFNKDDPTSFKLSESLSLYPQFMFHLRRSPFLQVFNNSPDE
CSYYRHNFVRQDLTQSLIMIQPILYSYSFHGPPEPVLLDSGSILPDRILLMDTFFQLVIY
HGETIAQWRKAGYQEQPEYENFKHLLVAPVDDAQEILQTRFPMPRYIDTEHGGSQARFLL
SKVNPSQTHNNLYSWGQETGAPILTDDVSLQVFMDHLKKLAVSSAA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcgacataccaggagtttatccaacagaatgaggatcgggacggcgtgcgttttagc
tggaacctgtggccctcgagcaggctggaagctacccggctggtagtgcctgtctcctgc
ctcttcaccccactcaaggagaggccagacctgccaccggtgcagtacgaaccggtcctc
tgtagcagggccaactgcaaggccgtactaaacccactatgccaagttgactacagagcc
aaaatatgggcgtgcaacttctgcttccaaagaaacccattccccccgtcatacgccggc
atatcggacgtaaaccagccggctgagctcatgccacagttctcaaccattgagtacatc
gtgcagcgcggccccccgaccccgctcatcttcctctacgtggtggacacgtgtctggag
gaggaggacctgcaggccctgaaggagtccctgcagatgtccctgtccctgctgcccccc
aacgccctggtaggcctcatcaccttcggacgcatggtgcaggtccacgagctgagctgc
gagggcattgcaaagagctacgtgttcagaggaaccaaggagctttcctccaaacaaatc
caggagatgctaggcctgacgaacccggcggcatctgggcctcagggtcgtcccgtggcc
cctcaggatccagccgtcacctgtaggttcctgcagccggtccataaggtagacatgaac
ctgacagacctgttgggcgagctgcagagagatccctggcctgtaccacaggggaagaga
ccactgcgctctactggaatagcactgtccatcgccgtgggcctgctggagggtacgttt
cccaacacaggggcccgtgtgatgatgttcatgggcggaccccccacccagggccccggt
atggtggtgggagacgaactcaagacccccatccgctcctggcatgacatcaccaaggac
aacgcacggcatctgaagaaagccaccaagtactacgaagccttggcgaaccgtgtggca
gtgaacggccacagtattgacatctacgcctgtgccttggatcagaccggacttctagag
atgaaatgtttatccaacctcactggaggtcacatagcgatgggcgactccttcaacacc
tctctgttcaagcagaccttccagagggtcttcagtaaggactacaacggagagttccgc
atggccttcggaggcacgctggaagtcaagacgtccagggagctgaaggtatcgggggcc
atcgggccctgtgtctccctcagcgccaagggaccgtgtatatcagagaacgaggtaggt
gttggaggaacaacccagtggaaaatctgcagtctcagtccctccactacgttggccttg
tacttcgaggtcgtcaatcagcacaacgccccaatccctcagggtggtagaggagcggtc
cagtttgtcacccagtaccaacactccaacacccagaggaggatcagggttaccactgtc
gccaggaattgggccgacgcccagtcccagatccagcacatcgagtcgtccttcgaccag
gaggcgtcggcggtcatcatggccaggctgggcgtgttcagggccgagtcggaagagggg
ccggacgtcctgcgctggctggacagacagctcattcgcctgtgtcagaagttcggtcag
ttcaacaaagatgaccccacctccttcaagctctcggagtccctctcactctacccacag
tttatgttccacctacgccggtcgccgttcctgcaggtgttcaacaacagcccagatgag
tgttcctactacagacacaactttgtccgccaggacctgacccagtctctcatcatgatc
cagcccatcctgtactcctactcgttccacggcccaccagagcctgttctcctggacagt
ggaagtattctcccagaccggatcctcctcatggacaccttcttccagctggtcatctac
cacggagagaccatcgcccagtggcgtaaggcgggttaccaggagcagccggagtacgag
aacttcaagcatctactggtagcacccgtggatgacgcccaggagatcctgcagacccgc
ttccccatgccccggtacatcgacacagagcacggagggtcccaggcccgcttcctcctg
tccaaggtcaacccctcccagacacacaacaacctctactcctggggacaggagaccgga
gcccccatcctcacagatgacgtcagtctacaggtgttcatggaccacttaaagaagctg
gccgtgtcgagcgccgcttaa
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