Salvelinus namaycush (lake trout): 120032363
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Entry
120032363 CDS
T07522
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04517
IgSF CAM signaling
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120032363
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120032363
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120032363
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120032363
Intermediate filaments
Intermediate filament-binding proteins
120032363
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
120032363
NCBI-ProteinID:
XP_038834335
UniProt:
A0A8U0U030
LinkDB
All DBs
Position
39:23490962..23576968
Genome browser
AA seq
2380 aa
AA seq
DB search
MTTVAAEYEHMEITQQYSSGDTVNNRWDEEWDNENSSARLFERSRIKALADVQFTEPDSG
YPAQVAFNYNMLEGRFKQLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYRDLSDGRMLI
KLLEVLSGEKLPKPTRGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGL
IWTIILRFQIQDISVETDGDNKEKRSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAF
NALIHKHRPDLIDFDKLKKSNAHHNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSVIT
YVVTYYHYFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNR
KFANSLNGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREGKL
ISDINKTWERLEKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQD
NFGFDLPAVDAATKKHEAIETDITAYEERVQAVVSVAKELEAEKYHDIKRIAARKDNVIR
LWEYLLELLKARRQRLEMNLGLQRVFQEMLYIMDWMDEMKMMLLSQDYGKHLLGVEDLLQ
KHALVEADIGIQADRVKAVNNNAQKFAIDGDVYKPCDPQVIRNRVAHMEFCYQELTQLAA
ERRARLEESHRLWKFLWEMAEEEGWIREKEQILSSDESGKDLTGTVRLLSQHRALEDEMS
GRAGHLQHTITEGQAMADGGHFGAAKIRECITNLRAQWAALEELAAVRKAHLEEACALHL
FQADADDADAWTLDALRIVSSGEVGHDEFSTQALVRKHKDATAEVASYRPVIDALHEQAG
ALPEEQVQSEEVKGRLAGIEERYKEVAELTRLRKQALQDALALYKMFSEADACEVWIDEK
EQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLMHNGHPSEKNIKS
QQDKLNNRWSQFRDLADQKKESLISALGVQNYHLDCNETKSWIREKTKVIESTQELGNDL
TGVMALQRKLTGMERDLAAIEDKLGDLRGEAERLAGEHPDQAKAIKDRLAEITAVWEEMK
ATLRNREESLGEASKLQQFLRELDDFQSWLSRTQTAVASEETPNTLAEAEKLLAQHEGIK
NEIRNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLFQS
HAYQLFLRDTTQAEAFLNNQEYMLAHTEMATTLEGAEGAIKQQEDFMTTMDANEEKINGV
VEAGRRLASDGNINADRIQERATSVDDRHKKNREAALELLMRLKDNRDLQKFLQDCQELS
LWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGMQLVLEKPETE
SVVKEKLSALQKMWEVLESTTQTKAQCLFDANKAELFTQSCADLDKWLGGLEGQIQSDDY
GKDLTSVNILLKKQQILENQVEVRQREVVQLQSQALVLSQEGNVTEEVDCQRQMVEHKFK
ELLDPLRKRKNFLVASREIHQFNRDVEDEILWVEERMPIATSTEHGHNLQTVQLLIKKNQ
TLQKEIQGHQPRFDDIFERSESLLMEDSLAVEAIRQHLADLQQLWGLMIEETEKRHARLE
QSHNAQKYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQIVEQSVEDYAETVH
QLSKTSRGLTAAGHPESERIGMRQSQVDKLYAGMKDLSEERRGKLDERFRLFQLNREVDD
LEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDAVNRLSDKLINAG
HADAATVAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILGRILDKHKKLP
EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQRRESEV
LEAWNTLLEACDVRRVHLLDTGDKFRFFSMVRDLMLWMEDVIRLIEAQENPRDVSSVELL
MNNHQGIKAEIDARNDSFTACIELGKSLLARKHYASEEIKDKLLQLMDKRKDMIDKWEDR
REWLRLILEVHQFGRDAGVAEAWLLGQEPYLFGRELGQSVDEVEKLIKRHEAFEKSAATW
EERFSALERLTTLELLEVRRQQEEEERRRKPPSPEPLPVQDSPLQSGVENGLQNGLPSDQ
DSPQNGLDRVEIMNGVAEQNSKDPSPIPSPTASRQGKGSLSSTLLTQNHYSPAAQMEGFL
HRKHEWEGHNKKASSRSWHNVYCVINNQEMGFYKDNKGAGQGIPYHNAIPISLMGAVCDV
AMDYKKKKHVFKLRVADGNEYLFQAKEEEEMSTWIQAILNAGTPDKVSITPSNQSTPASS
RAQTLPATVTLTTESSPGKREKDKEKDKEKRFSLFGKKKL
NT seq
7143 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcggaatatgaacacatggagatcacgcagcagtacagtagcggc
gacacggtcaacaaccgctgggatgaagagtgggataacgagaacagctcggctcgcctg
ttcgagcgctcgcgcatcaaggccctggcagatgtacaattcaccgagccggactctggt
taccccgctcaggtggctttcaactacaacatgttagaagggcgctttaaacagcttcaa
gatgagcgcgaagcggtgcagaagaagaccttcaccaaatgggtgaactctcacctctcc
cgggtgtcctgccgcatcacggacctgtacagggacctgagtgatggacgcatgctcatc
aaactgctggaggtgctctctggggagaaactgcccaagcccaccaggggacggatgcgt
atccactgcctggagaatgtggacaaggccctgcagttcctcaaggagcagagggtccac
ctggaaaacatgggctcacatgacatcgtcgacggcaaccaccgcctcaccctgggcctc
atctggaccatcattctcaggttccagatccaggacattagtgttgagactgatggagac
aacaaggagaagagatcagccaaggatgccctgctcctctggtgccagatgaagactgct
ggctatccaaacgtgaacattcacaacttcagcaccagttggcgagacggcatggcattc
aatgccctcatccataagcacaggccagacctgattgactttgacaagctgaaaaagtcc
aatgcccaccacaacctgcagaatgccttcaatttggctgagcagcatctggggcttacc
aagctcctggacccagaggatatcagtgtggaccaccccgatgagaagtctgtcatcaca
tacgtggtgacatactaccactacttctccaaaatgaaggccctgaaagtggaggggaaa
cgtattgggaaggtactagacaatgccattgagacagagaagatgattgagaagtacgag
tctctggcctcagacctgttggagtggatcgagcagaccatcatcatcctcaacaatcgc
aagtttgccaactctttaaacggggtgcagcagcagcttcaagccttcaacacatatcgc
acggttgagaaaccccctaagtttactgagaagggcaacctggaggtgcttctgtttacc
atccagagcaagatgagggcaaacaatcagaaagtctacatgcccagggagggcaaactc
atctctgacattaacaagacctgggagagactggagaaggcagagcatgagcgggagctg
gctctgaggacagagctgattcgacaggagaaactggagcagctggctcgccgctttgac
cgcaaggctgccatgagggagacctggctgagtgagaaccagcgcctcgtctcacaggac
aactttggcttcgaccttccagcggtggacgcggccaccaagaagcacgaggccatcgag
acggacattacggcttacgaggagcgtgtgcaggccgtggtgtccgtcgctaaggagctg
gaggcagagaaataccacgacatcaaacgaatcgcagcacgcaaggacaatgtgatccgg
ctgtgggagtacctgctggagcttctgaaggcgaggcgccagcgcctggagatgaacttg
ggtctgcagagggtcttccaggagatgctttacatcatggactggatggacgagatgaag
atgatgctactgtcccaggactatgggaagcatctgctcggagtggaggatctcttgcag
aaacatgccctggtggaggctgacatcggcatccaggccgaccgagtcaaagctgtcaac
aacaatgctcagaagtttgccatcgacggcgatgtttacaagccctgtgaccctcaggta
atacgcaaccgcgtggcacacatggagttctgctatcaggaactgacccagctggctgcc
gagcgacgggcccgcctggaggagtcccaccgcctctggaagttcttatgggagatggcc
gaggaggagggctggatccgtgagaaggagcagatcctgtcgtcggacgagagcggcaag
gacctgacgggcactgtgcgcctgctgagccagcaccgcgctctggaggacgagatgagt
ggccgtgcaggtcatctgcagcacaccatcactgagggccaggccatggccgacggcggc
cacttcggcgctgccaagatccgtgaatgcatcaccaacctgcgggcacagtgggcagcg
ttggaggagctggcagccgtgaggaaggcccatctggaagaagcgtgtgccctgcacctg
ttccaggcggacgcagatgacgccgacgcctggaccctggatgccctgcgcatcgtgtcc
agcggcgaggtgggccatgacgagttctccacacaggccctggtgcgcaaacacaaggac
gccaccgccgaggtggccagctatcggccggtgatcgatgcgctccatgagcaggctggc
gccttgcctgaggagcaggtccagtcggaagaggtcaagggccgcctggcaggcatagag
gagcgctacaaggaggtggccgagctgacccggttgagaaagcaggcactgcaggacgcc
ctggccctctacaagatgttcagcgaggcggacgcctgcgaggtgtggatcgatgagaag
gagcagtggctcaacagtatggagatcccagagaagctggaagacctagaggtcattcag
cacaggttcgagagcctggagcctgagatgaacaaccaggcgtcacgcgtcgctgttgtg
aaccagatcgccaggcagctgatgcacaatggacaccccagtgagaagaacatcaaatcc
cagcaagataagctcaacaacagatggagccagttccgggatctggcagaccagaagaag
gagtctctaatctcggcgctgggtgtgcagaactaccacctggactgcaacgaaaccaag
tcatggatccgcgagaagacaaaggtcatcgagtccacccaggagctgggcaacgacctg
acgggtgtcatggcgctgcagcgtaaactcactggcatggagcgtgacctggctgccatc
gaggacaagctgggcgacctgcgcggcgaggcagagcggctggccggcgagcacccggac
caggccaaggccatcaaggaccgcctggccgagatcaccgccgtgtgggaggagatgaag
gccacactgcgtaatcgcgaggagtcccttggtgaggccagcaagctgcagcagttcctg
cgcgagctggatgacttccagtcgtggctgtcgcgcacacagacagccgtcgcctcggag
gagacgcccaacacgctggccgaggcagagaagctgctagcgcagcacgagggcatcaag
aacgagatccgcaactacgaggaggactaccagaagatgcgcgacatgggcgagatggtg
acccagggccagaccgatgcccagtacatgttcctgaggcagcggctacaggccctggac
acgggctggaatgagctgcacaagatgtgggagaaccggcagaacctgctgttccagtcc
cacgcctaccagctgtttctcagggacaccacgcaggccgaggccttcctcaacaaccag
gagtacatgctggcccatacagagatggccactacgcttgagggggccgaaggagccatc
aagcagcaggaggacttcatgaccaccatggacgccaacgaagagaagataaacggtgtg
gtggaggctggcaggcggctggcgagtgatggcaacatcaacgccgaccgcatccaggag
agagcgacgtctgttgacgacaggcataagaagaaccgcgaagctgctctggagctactg
atgaggctgaaggataaccgggaccttcaaaagttcctacaggattgccaggagctgtcc
ctgtggatcaatgagaagatgctcacggcccaggacatgtcgtacgacgaggccaggaac
ctccacagcaaatggctcaagcatcaggccttcatggccgagctgcagtccaacaaggag
tggctggacaaaattgagaaggatgggatgcagctggtgttggagaagcctgagacagag
tcggtggtcaaggagaagctctcagccctccagaagatgtgggaagtgttggagtccacc
acccagaccaaagcccagtgcctgtttgacgccaacaaggccgagctgttcacacagagc
tgtgctgacttggacaagtggctgggtggcctggagggccagattcaatcggatgactat
ggcaaagacctgaccagcgtcaacatcctgctcaagaagcagcagatattggagaaccag
gtggaggtccgtcagagggaggtggtgcagctgcagagccaggcactggtcctcagccag
gaagggaatgtcacagaggaggtggattgccagagacagatggtggagcacaagttcaaa
gagctgctcgacccgctgaggaagagaaagaacttcctggtggcctcccgcgagatccac
cagttcaaccgcgacgtggaggacgagatactttgggtcgaagagaggatgccaattgca
acctccacagagcatggtcacaacctacagaccgttcaactgcttatcaagaaaaatcag
actttgcagaaggagattcagggacaccagccccgcttcgatgacattttcgagcggagc
gagagcctgctgatggaggacagccttgccgtggaggccattcgccagcacctggccgac
ctgcaacagctgtggggtctgatgattgaggagacagagaagcgtcacgcccgactggag
cagtcccacaacgcccaaaagtactactttgatgccgccgaggctgaggcctggatgagc
gagcaagagttgtacatgatgtctgaggagaaggccaaggatgagcagagctctgtagcc
atgctgaagaagcaccagattgtggaacagtcggtggaggactatgctgagacagtccat
cagctctccaagaccagcagaggcttgacagctgcaggacatccagagagtgagaggata
ggcatgcgtcagtctcaggtggacaagctctatgccggcatgaaggacctgtctgaggag
aggcggggcaaactggatgagaggttccgcctgttccagctcaaccgcgaggttgacgac
ttggagcagtggattgccgagcgggaggtggtggccggatctcacgagctgggacaggac
tacgagcatgtcactatgctccaggagcgcttccgggagtttgcccgcgacacaggcaac
atcggccaggagcgtgtagatgccgtcaaccgcctgtccgacaagctgattaatgcgggc
cacgcagatgccgccacggtggctgagtggaaggacggcctcaacgaggcctgggctgac
ctgctggagctcatcgacacgcgcacgcagatcctggccgcctcctacgagctacacaaa
ttctaccacgacgccaaggagatcctgggccgcatcctggacaaacacaagaagcttccc
gaggagttgggacgtgaccagaacacagtggagacattgcagcggatgcacaccaccttc
gagcatgacatccaggccctgggaacacaggtgaggcagctgcaggaggatgccgtccgc
ctccagtcggcctacgccggcgacaaggcagacgacatccagcggagggagagcgaggtg
ctggaggcctggaatacactgctggaggcctgcgatgtccgcagagtccacctcctggac
acgggcgacaaattccgcttcttcagcatggtgcgcgacctcatgctgtggatggaggac
gtcatccgtctcatcgaagcccaggagaatccaagggacgtgtcctccgtggagttgttg
atgaacaaccaccagggtatcaaggctgagatcgacgcccgcaatgacagcttcaccgcc
tgcattgagttgggcaagtctctgctagccagaaagcactatgcatcagaggagatcaaa
gataaattactacagctgatggacaagaggaaagacatgattgacaagtgggaggaccga
cgggagtggttaagactaattttggaagttcaccagtttgggagggatgcaggggtggca
gaggcgtggctgctgggacaggaaccatacctattcggccgggagttggggcagagcgtg
gacgaagtggagaaactgatcaagaggcacgaggcattcgagaagtcagccgctacttgg
gaggagcgcttctcagcgctggagaggttgactacgttggagttattggaagtgagaaga
cagcaagaggaagaagagagaaggagaaaacccccttcgccggagcctttaccggtgcag
gactcaccactgcagagtggggtagagaacggattgcagaacggactgccctcagaccaa
gattctccacagaatggcttggatagagttgagatcatgaatggagtggcggagcagaac
tcaaaggacccgagccccattccctcacccacagccagccggcagggcaagggcagcctg
tcctccacgttgctgacccaaaaccactattcgcctgcggctcagatggagggcttcctg
catcgcaagcatgaatgggagggacacaacaagaaggcctcaagcagatcctggcataac
gtgtactgcgttatcaacaatcaggaaatgggcttctacaaagacaacaagggtgctggt
caaggcatcccctaccataatgcgattccgatcagtctaatgggggctgtgtgtgatgtg
gccatggactacaaaaaaaagaagcatgtcttcaaactcagagttgctgatggaaatgag
tatctcttccaagccaaagaagaagaggagatgagcacatggatccaggccattctgaat
gcggggacacctgacaaggtatcgattacgcccagcaaccagagcactccggcgtcgagc
cgagcccagaccctgcccgccaccgtcaccctcaccaccgaatccagcccgggcaagcgg
gagaaagacaaggaaaaggacaaggagaagcgattcagcctctttggcaagaaaaaacta
taa
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integrated database retrieval system
