Salvelinus namaycush (lake trout): 120032370
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Entry
120032370 CDS
T07522
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120032370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snh03009
]
120032370
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120032370
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
120032370
NCBI-ProteinID:
XP_038834390
UniProt:
A0A8U0Q094
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Position
Sna1:30856680..30860504
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AA seq
310 aa
AA seq
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MMFSFNMFDHPIPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRL
NITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMV
ATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKA
VSIIECDMNVDFDAPLGYKEPERRYKAPEEPTEEEGDPSTWTDMDMRFRAFTGSGNRLDG
KKKGIEPSPVPIDPSDIKRGIPNYEYKVGRITFIRNSRPQPRKTTEDEDSEFIAFSGEGQ
SLRKKGGRKP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatgttttccttcaacatgtttgatcacccgatcccacgggctttccaaaaccgtttc
tccactcaataccgctgctactctgtgtccatgctggcgggtcccaacgaccggtcagat
gtggagaaaggaggaaaaattataatgccgccatcagcacttgatcaactaagcagactt
aacattacctaccccatgttgttcaaactgaccaacaagaactcagacagaatgacacac
tgtggtgtcttggagtttgtagcagatgagggtatttgttacctgccacactggatgatg
cagaatctcctgctggaggaagggggcctggtccaggtggagagcgttaacctcatggtg
gcaacatattccaagttccagcctcagagcccagacttcctggatatcactaaccccaaa
gcagtgttggaaaatgccttgagaaactttgcctgcttaaccacaggagatgttattgca
attaactacaatgaaaagatctatgaactgcgagtgatggagactaagccagacaaggca
gtatctatcattgaatgtgatatgaatgtggactttgatgctccgctgggttacaaagaa
ccagagagacgttacaaagcaccagaggagcccacagaagaggaaggagaccccagcact
tggactgacatggacatgagattcagagccttcactggttcaggcaatcgtctggatggc
aaaaagaaaggcattgagcctagccccgtccccatcgatcccagtgacattaaaagaggg
attcctaactacgagtacaaggtcggaaggatcaccttcatcagaaactccaggcctcag
cccaggaaaacaacagaggatgaggattcagaattcatcgccttttctggtgagggacag
tcactacgcaagaaaggtggcagaaagccttga
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