Salvelinus namaycush (lake trout): 120032372
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Entry
120032372 CDS
T07522
Name
(RefSeq) voltage-dependent calcium channel gamma-5 subunit-like
KO
K04870
voltage-dependent calcium channel gamma-5
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04260
Cardiac muscle contraction
snh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120032372
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120032372
04261 Adrenergic signaling in cardiomyocytes
120032372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120032372
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120032372
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Motif
Pfam:
PMP22_Claudin
Claudin_2
SUR7
DUF4064
DUF716
RGS12_us1
DUF6336
Motif
Other DBs
NCBI-GeneID:
120032372
NCBI-ProteinID:
XP_038834350
UniProt:
A0A8U0U036
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Position
Sna39:17225646..17237685
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AA seq
280 aa
AA seq
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MTLCGRKVLTVLSSVFAVCALGLLGIAVSTDYWLYLEEGVILPLNQSTELRMSLHSGLWR
VCFTAGDEKGRCFTIQYVMPTNVQLTSESTVSVLKMIRSATPFPLVSLFFLFIGFVLSNI
GHIRPHRTILAFISGIFFILSGLSLVVGLVLYISSINDEMLNRTKTNEAYFSYQYGWSFA
FAAISFLLTETAGVMSVYLFMKRYTAEEMYRPHPGLYGPRHSNCSDYSGQFLHPDTWNQR
GRSPSSISSEASLQMNHSLHSNYPALLKCPEYDRMSSSPC
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgtgtggcaggaaggtgttgacagtgctgagcagcgtgttcgctgtgtgcgcc
ctgggcctgctgggcattgctgtcagtactgactactggctctatctggaagagggcgtc
atcctgcccctcaaccagagtaccgagttacgcatgtccctgcactcgggcctctggagg
gtctgcttcacagctggagatgagaagggccgttgtttcaccattcagtatgtgatgccc
accaacgtgcagctgacctctgagtctacagttagtgtgctgaagatgatccgttcagcc
acccccttccccctggttagtctcttcttcttgttcatcggttttgtcctgagtaacatc
ggacacatccggccccaccgcaccatcctggccttcatctccggaatcttcttcatcctc
tcaggtctgtctctggtggtgggcctggtgttgtacatctccagtattaatgatgagatg
ttgaacaggaccaagaccaacgaggcctacttcagctaccagtacggctggtccttcgcc
ttcgctgccatctccttcctgctcactgagacggccggtgtcatgtccgtctacctgttc
atgaagcgctacacggccgaggagatgtacagaccccacccgggcttatacgggccgcgc
cacagcaactgctccgactactctggtcagttcctccacccggacacctggaatcagcgc
ggccgcagcccctccagcatctccagcgaagcctcgctccagatgaaccactccctccac
tccaactacccagcgctcctcaagtgtcccgagtacgaccgcatgtcctcctccccatgc
tga
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