KEGG   Salvelinus namaycush (lake trout): 120032525
Entry
120032525         CDS       T07522                                 
Name
(RefSeq) WD repeat domain-containing protein 83
  KO
K13124  mitogen-activated protein kinase organizer 1
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:snh03041]
    120032525
Spliceosome [BR:snh03041]
 Complex C
  Other components
   Complex C specific factors
    120032525
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_VPS8 PQQ_2 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WD40_like Beta-prop_HPS5 Beta-prop_WDR35_2nd PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_Nup120_160 eIF2A RCC1_2 Rax2
Other DBs
NCBI-GeneID: 120032525
NCBI-ProteinID: XP_038834592
UniProt: A0A8U0Q220
LinkDB
Position
Sna39:complement(4617972..4622037)
AA seq 322 aa
MSFPQPKPEVPQLPQNLLRTIDCQQGAVRAVRFNADGNYLLSCGSDKSLKLWSVSRGTLL
KTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVATGQVTRKLRGHAGKVNCVQFNEE
ATVILSGSIDGTVRCWDTRSRKFDPIQILDEAQDGVSSLKVSEHELLTGSVDGRVRRYDL
RMGQLHVDFINSPITCVCFSADAQCTLTSSLDSTVRLLDKSTGEMLGEYTGHKMKGYKLD
CCLSSKDTHVLSCSEDGHVYCWDLVEGSLTLKLPVGKAVVQSLSFHPSETRLLTAMEGRV
QVWGAEPEETEEDVVVVQQEKV
NT seq 969 nt   +upstreamnt  +downstreamnt
atgtcgtttccccagcccaaacctgaggtccctcagctcccccaaaaccttctcaggacc
atagactgccaacaaggggctgtaagagctgtgcgattcaatgctgatggtaactacctg
ctgtcttgcggcagtgacaagtctctgaagttgtggagtgtaagtcgagggacactactg
aagacgtacagtggccatggatacgaagtgctagatgctgatggttcctatgacaacagc
cagctgtgttcctgcagctcggacaagacggtgatcctctgggacgtcgccacgggacag
gtcacccggaaactcaggggtcacgctgggaaagtcaactgtgtccagttcaatgaagaa
gctacggtcattttatctggctccatagatggtacagtgcgttgctgggacaccaggtcc
agaaaatttgaccccatccagattctggacgaggctcaagatggtgtcagcagtctgaag
gtgtctgaacacgagctgctcactgggtcagtggatgggagagtgagacggtatgacctg
cggatgggccagctgcatgtggacttcatcaacagccccatcacgtgtgtgtgtttcagt
gcggacgcccagtgcactctgacctccagcctggactccaccgtgcgtctactggacaag
agcacaggggagatgctgggagagtacacaggacacaagatgaagggctacaagctggac
tgctgtctgtccagtaaggatactcacgtcctgagctgctctgaggacggacatgtgtac
tgctgggacctggtagagggttctctgacgctgaagctgccagtcgggaaggctgtcgtc
caatcgctgtctttccatccctcggagacccgcctcctcacagccatggaggggcgtgtc
caggtgtggggggcggagccagaggaaactgaggaggacgtggtggttgttcaacaggaa
aaagtatag

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