Salvelinus namaycush (lake trout): 120032650
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Entry
120032650 CDS
T07522
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120032650
Enzymes [BR:
snh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120032650
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120032650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
120032650
NCBI-ProteinID:
XP_038834770
UniProt:
A0A8U0U0H5
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All DBs
Position
Sna39:6838791..6848311
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AA seq
655 aa
AA seq
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MRGSSSYGDRDRDRGRDRGPRFGSSSWGGPPPMKKFGNPGERLRKKKWDLDELPKFEKNF
YNEHPELQRMTQYDIDEFRRRKEITVSSTGCPRAITSFHQAQFPQYVMDVLLSQNFKEPT
SIQSQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRE
LAQQVQQVAHDYGKTSRIKSTCVYGGAPKGPQIRDLERGTEICIATPGRLIDFLEAGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRRLAEDFLRDYV
QINVGALELSANHNILQIVDVCMENEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDELT
RRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDIKFVINYDY
PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVNSG
HGGGGGGRMRYRGGGSSANNPNMMFQDVCESRLRSVSGGNKPDSRGSSFSRDGRSGGGRD
GDTRSSSSSSYRDRSRVSRGSYGSGGADQYQSYGTQYSSRAGGAANGAPRGSSGGGQNQS
SQPQGVFGPAPPPPAGPKPLMAQLMAPPQPPLMGFIGQPPYPFAPPPPPTPPPRK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagggggagttcgtcgtatggagaccgagatagagaccgtggacgagacagagggcct
cggtttgggtccagtagctggggcggccctccacctatgaagaagtttggaaaccctgga
gaacgccttcgcaagaagaagtgggatctggatgagctgcccaagtttgagaagaacttc
tacaatgagcacccagagctccagcgcatgactcagtatgacatagatgagttccgcagg
aggaaggagatcacagtcagcagtactggctgccccagggccatcaccagcttccaccaa
gcacagtttccccagtatgtaatggatgtgctactgagtcagaacttcaaggagcccaca
tccatccagtcacagggcttccctctggccctgagtggcagggacatggtgggcatcgct
cagactggctccggcaagaccctggcatatctgcttcctgccattgtgcacatcaaccat
cagccctatctagagaggggagacggacctatttgcctggttctggccccgaccagagag
ttggcccagcaggtgcagcaggtggctcatgattatggaaagacctcccgtatcaagagt
acctgtgtctatggaggagcacccaagggaccgcagatacgtgacctggagagaggtaca
gagatctgcatcgccaccccggggcgtctcatagacttcctggaggcagggaagaccaac
ctgcggcgctgcacctacctggtgctggacgaggctgaccgcatgctggacatgggcttc
gaaccacagatacgcaagatcgtggaccagatccggccggaccgccagactctgatgtgg
agtgccacctggcccaaggacgtgcgtcggctggcagaggacttcctgcgggattatgtc
cagatcaacgtaggcgctctggagctcagcgccaaccacaacatcctgcagatagtagac
gtctgcatggagaacgagaaggacaacaagctgctccagctgatggaagagatcatggct
gagaaggagaacaagaccatcatctttgtggagacaaagaagcgctgtgacgagctcacc
cgcaggatgagaagagatgggtggccagccatgtgtatccatggggacaagagccagcca
gagagagactgggttctgacagaattccgtagcggcaaagctcctatcctcatcgccact
gatgtggcgtctcgtggtctggacgtggaggatatcaagtttgtcatcaactacgactac
cccaactcgtctgaggactatgtgcacaggatcggccgtacagcccgcagcaccaacaag
ggcacggcctacaccttcttcaccccgggtaacctgcgccaggccagggacctggtccga
gtcctggaggaggcccggcaggccatcaatcccaaactgctgcagctggttaactctgga
catgggggaggagggggtggcaggatgcgttaccgtggcggcggctccagcgccaacaac
cccaacatgatgttccaggacgtgtgtgagagtcgcctgcgctccgtcagcgggggcaac
aagccagacagccgcggcagcagctttagccgggacgggcgcagtggcgggggtcgggac
ggagacactaggtcctcatcctcttcctcttacagggaccgaagcagggtcagccgggga
agttacggctccgggggggccgatcagtaccagagctatggtacccagtacagctccagg
gctgggggggcagctaatggggcccctaggggtagtagtggtggggggcagaatcagtcc
agtcagccccagggtgtgttcggtccagctcctccacctccagcagggcccaagcccctc
atggcccagctgatggccccgccacagccccctctcatgggcttcatagggcagcctccg
tacccctttgctccccccccgcctcctacacccccacccaggaagtag
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