Salvelinus namaycush (lake trout): 120032693
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Entry
120032693 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43-like
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120032693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120032693
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120032693
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120032693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
PA
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
120032693
NCBI-ProteinID:
XP_038834819
UniProt:
A0A8U0TZG1
LinkDB
All DBs
Position
Sna3:55178484..55365470
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AA seq
859 aa
AA seq
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MTVPQRRLAGLWPWLLIAALQVVFGQTGLELAAAVETQRSAPRAVIKVTLLRHEPTGKPI
TLEGLFVGGSAGSAEGKLMQSHPLSLCNTSEDERQESDFISIVKLESPERKVPQCLPLLD
KARLALERGAQAVIFDVTDDNDAALELHDSDSLPLPVVLVKAEDAEELMGLVNKNEEARV
RIDIKKEDPKWPHYDVGILLTIVLAILAIVLIFAFRYRCKSNRTWDSVHQQTMRAISRLE
TRMYSSQGCGGSQRHRGGWGSNSSSNSSPVCAICLEEFLDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGTELSRQPQRSRLQQTPEHSQGFLHTHPYPHAFPQHPIPFSMRP
HYPRGPSGPYPSLGHYSSSPPLDPQTLRFLPSWPLGSGCGYIHPTEGPGRPHKAGSSCRT
AGHPLGSHYGPGSHRSCHAYRSGCPAQRSNSSSRLHHIPSFAPRASEGGAHSRGGEGGSC
SGGSYRTDRSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDY
DPFVYYGPGLGRTGRRDSMEAGAQRPRSLDSVMNRDRGRGSPEEQPQAVFSHVHYHRHRH
HHYGEDGGREHAQGQGPGRGSDEEQGAAVAIGSGTGSPPALDKDFPVCPLKHSPCQCPKA
EHTDSREAHGHRIEGQDHELSLSPPSGPPPVLVAPAPLAAPAPCCHQDHGHGGHPHRRAD
RLGGCVLDGPSVLFHQSLELQDDCSIHIHYGQGPSYCCPPPDLPMPVPFILDSGGMGGLE
DWACCGGPHHVVWQKRVQQAHSEPQLLGPGLGGPMDRPPPPCSRRHHGHHSPAHDRNTDF
CLYCQTLHNNQGSEEESGV
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttccccagcggcgattggccgggctctggccgtggctgctcatagcggccctg
caggtggtgttcggtcagacgggcctggagctggcggcggccgtagagacacagcgctcg
gcccccagggctgtcatcaaggtgacactgctgagacacgagcccacggggaagcccatc
actctggaagggctgttcgtcggagggagcgccggctctgcagaggggaagctcatgcag
tctcaccctctgtccctgtgcaacaccagtgaagatgagcgccaggagtctgacttcatc
agcatcgtcaagctggaaagcccggagcgcaaggtgcctcagtgtctgcccctgctcgac
aaggctcgcctggcactggagagaggtgctcaggctgtcatcttcgatgtcaccgacgac
aacgacgctgctctcgagctgcatgactctgactccctgccgcttccggtggtgctggtg
aaggctgaggatgctgaagagctgatgggactggttaacaagaacgaggaggcaagagtc
cgcatcgacatcaaaaaagaggacccaaaatggccccactatgatgttggtatcttgctc
actatagtcctggctattctggccatcgttttgatctttgccttccggtaccgatgcaag
tccaacagaacctgggactcagtccatcagcagaccatgcgagccatcagtcgtctggag
acgcgaatgtacagctctcagggctgcgggggctcacagcgccaccgtgggggctggggg
tctaatagcagctccaactccagccccgtctgtgccatctgtctggaggagttcctggat
ggacaggacctgaggatcatctcgtgtgctcatgagttccataaggagtgtgtggacccc
tggttgctgcagcaccgcacctgtcctctctgcatgcacaacatcatgggtacagagctg
tcacgtcagccccagaggagcagactgcagcagacccccgagcacagccagggtttcctg
cacacccacccctacccccacgccttcccccagcatcccatccccttctccatgaggcct
cactacccccgtggcccctccggcccctacccctccctgggccactacagcagctcccca
cccctggacccccagaccctccgcttcctccctagctggcctcttggctctggctgtgga
tacatccaccctacagagggccccgggaggcctcacaaggccgggagcagctgtaggacg
gcaggtcaccctctggggtcccactacggccccgggtcccaccgctcctgccacgcctac
cgctccggctgccccgcccagcgcagcaactccagttccaggctccaccacatcccctcc
tttgctccccgcgcctccgaagggggggcccatagccgggggggcgagggaggcagctgc
tctggggggagctaccggacagatcgcagtggctacctggcagacgggccggccagtgac
tccagctctggcccctgtcacggttcatccagtgactcggtgctcaactgtaccgacgtg
tccctgcagggtgtgtacggtagctggtccacgttccgcagctccctaagcagtgactat
gatccgtttgtgtactacgggccgggtttgggacggacaggccgcagggacagcatggag
gcaggggcccagagaccaaggtccctggactcagtgatgaacagagacagaggacgaggg
agccctgaggagcagccacaggctgtgtttagccacgtccactaccaccgccacagacac
caccactacggagaggacggggggcgggagcacgcccagggacaggggccaggcaggggg
tcagacgaggagcagggggctgctgttgctattggctctggtactggttctcccccggct
ctggacaaggacttcccagtgtgccctctgaagcacagcccctgtcagtgccctaaggca
gaacacacagacagtagggaggcccacggccacaggatagagggtcaggaccatgagctt
agcctcagccccccgtcaggccctcctcctgtcctggtagcaccagcacccttagcagcc
ccagccccctgctgccaccaggaccacggccatggaggccacccccaccggagggcagac
cggctcggcggctgtgtcctcgacggcccctcggtgctcttccaccagagcctggaactg
caggacgactgtagcatccacattcactacggccagggccccagctactgctgccccccg
cctgacctgcccatgcctgtgcctttcattctggactctgggggtatggggggcctagag
gactgggcctgctgtggagggccccaccatgtagtgtggcaaaagcgggtgcagcaggcc
cactctgagccgcagttgctggggccagggctggggggccctatggacagacccccgccc
ccatgcagcaggcgccaccacggtcaccacagcccagcgcacgaccgcaacacagacttt
tgtttatactgccaaacattacacaacaatcagggatcagaggaggagtccggtgtgtga
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