Salvelinus namaycush (lake trout): 120032800
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Entry
120032800 CDS
T07522
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120032800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120032800
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
120032800
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Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
120032800
NCBI-ProteinID:
XP_038834909
UniProt:
A0A8U0TZJ7
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Position
Sna39:complement(23043048..23073273)
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AA seq
520 aa
AA seq
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MLGGNGAGIGTRTGGARPGNGTGLTALQVNNPGTNMSGAEGGRFDDRIRQYSAEVVYSGS
EPESDSGDDDETMGSAGDKRGVKRERAEMEVAASATSLGLPPGGYGGVTGGATGAKPGKK
TRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFAT
RKLQPMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSEGDGCTEP
TKDMMKSTFTMANLPSGVNTQPMSTSSSSTTSSVAMHLQNSIPATCWQVSAGINTHSATS
TVLKTSATSTSVMLPGGFTLMSGATLPPGTHTIPLSQLQAFQGPLAQTNITTAGQGQQTT
LLRLPATVSLTGGGMGQQLQAIQVHPSSQQSSVSHSDLSHITSNSTVSLPTTIVTSSVPS
SMGGHMMYPGAHTVMYATPTTSLCDGSLTVLNTFPQTAHTQSHDPGAVSQVFLTGHPGTV
QIPVSAVQLHPMVIGQQSSSSNLTELQVVNLDAQHHSKDD
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttggggggaaacggggcaggaatcggtacaagaacagggggcgcacgacctggaaat
gggactgggttgaccgctctgcaagttaataacccaggaacgaacatgagtggtgccgaa
ggtggaaggtttgacgaccgaatcagacaatactcagccgaggtggtgtacagcggctct
gaaccagagtccgactccggggatgatgatgagaccatgggttcagccggggacaaaaga
ggggtgaaacgggagagagctgagatggaagtcgctgcatcggcgacttctctggggcta
ccccctggaggttatggcggtgtcacgggaggtgcaacaggggcaaagccaggcaagaaa
acccgcggacgagtcaagatcaaaatggaatttatagacaacaaacttcggcggtacaca
acttttagcaagaggaagactggcattatgaagaaggcctacgagctctccactctgacg
ggcacccaggtcctcctcctggtggccagcgagacgggccacgtctacacgtttgccaca
cgcaagctccagcccatgattaccagcgagacgggcaaggcgctcatccagacgtgcctc
aactcgcccgactctccgccccgcaacgacccgtccaccgaccagcgcatgagcgccaca
ggcttcgaggagacggacctcacctaccaggtgtcggagggtgacggctgcacggagccc
accaaggacatgatgaagtcgacgttcaccatggccaatctgccttccggtgtcaacacc
caacccatgtcgacgtcttcttcctccaccacctcctccgtggccatgcacttgcagaac
agcatccctgccacctgctggcaggtctcggcgggcatcaatactcacagtgccaccagc
acggtgctgaagacctcggccacgtcaacgagcgtcatgctacctggagggttcaccctc
atgtccggcgcaacgcttccccctggcacgcacaccattccactcagtcagctgcaggcc
ttccagggccccttggcccagaccaacatcaccaccgcagggcagggccagcagaccacc
ctgctccgcctacctgcaactgtctcgctcacaggtggagggatgggccagcagctgcag
gccattcaggttcaccccagcagccagcagagctctgtgagccacagtgacctctcccac
atcacaagcaactccacagtgagcctccccaccaccatcgtcacgtcctcagtgccctcg
tcgatgggtggtcacatgatgtaccccggcgcccacactgtcatgtacgccacacctaca
acctcgttgtgcgacggcagtctgaccgtgctcaacaccttcccacagacagcccataca
cagtcccatgaccccggcgctgtatcgcaggtgttcctcacaggacatcctgggacagtt
cagatccctgtgtcagcagtgcagctccacccgatggtgattggtcagcagtcaagcagc
agcaacctcacagagcttcaagtggtcaacctggacgcccagcatcactcaaaggacgat
tga
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