KEGG   Salvelinus namaycush (lake trout): 120032880
Entry
120032880         CDS       T07522                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120032880 (atxn2l)
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120032880 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 120032880
NCBI-ProteinID: XP_038835035
UniProt: A0A8U0Q1I0
LinkDB
Position
Sna3:complement(56562855..56585581)
AA seq 994 aa
MSFRRQNQQPGSGGRKTSNGTAGPAGLHPHISGSNTNRAVPGRTRNTMKPPSQSSPVFEG
VYNNTRMLHYLTAVVGSTCDVRVKSGNVYEGIFKTLSSRCELVVDAVHKRSEGGEANGDG
GGGLPPSLPRIEEITDTMIFSPSDLVTMTCRDVDLNYAIRDAFTDTAISSSRVNGEHREK
VLQRWDGGDSNGEGFDLETDTSNGWDASEMFKFNEETYGVTSTYDSSLSMYTVPLERGSS
DGFRQREARAARLANEIEGSPQYRHRTNLENDDKSEEDKYSAVVRERDEGRERGSPGFQS
SAGSREGKYIPLPQRAREMGVSPSSLRGGASGPIPNRTGVPGSSRPSQGSDRSSPLSVRG
AYSPHQSQASPPAQPSSPTPSSSSSHPIPHSISHPQALADASRSSVNGVSSRTSPKAQRA
VQTNRTLRNPSSQSSPAVSRSPKLDDPVLAGPAYLDTSSSSIASATPKSSGPTPLFTVDV
NEILSSAAKERTEGPVSPQDGKSGKVPSVLQRTQLEELRKFGKEFRLQPSSSPSAGPTSS
DPAQPSPSDSATTAESIPAPGHTPSQDPQTGEGSSFTPNPTTPTPSPAPNTTSQSSGQDR
QAAGTPQPARTPGSEEGGERVEGVADQVKKSTLNPNAKEFVFKAPMTLVKPSPAPTPPRP
TPLSPSVVLQPPPGQQAIYSTPYLSYLSPVQIQGHSVQPPQMYQYTMSTVQQGKYPRAKG
QVVGPRPDHHGSSQPQMLQAAASAAGPPLVASPYPQAYLQYSQVIQGMPHYPGQPMYSML
QGGARMLTQAGHPQALGPPGPQYPGQTEGPPGPQPAMYAPQQFSHHSSSMHPPQPSSTPT
GSQPPPQHTAPSPGHGQSGQGGPQPQSMYHAGPLPAPTPPNMPPGHSSPQASYPMQGYSL
PTHQPMAQHYPGLGQLTQAHVAQGMSGPHHQGGHGPPQMMLHYAPPPQQGPGSAQQHGPP
PQQGAHQHYYIQHPQAVQVQAHPTQQLSFHPPGN
NT seq 2985 nt   +upstreamnt  +downstreamnt
atgtcttttcgtcgacagaaccaacaacccggttcaggcggacgaaaaacctccaatgga
acagcagggccagccggtttgcaccctcatatcagcgggagcaataccaacagagctgtg
cctggaaggacaagaaatacaatgaagccgccatctcagtcctctcccgtatttgaaggt
gtctacaacaacaccaggatgcttcactatctcacagctgtagtgggctctacctgtgac
gtccgagtgaagagtggaaatgtgtatgaaggcatcttcaagaccctcagctcaaggtgt
gagctggtggtcgacgcggtccacaagcggagtgagggaggagaggcgaatggagacgga
gggggaggcttgcccccctctctgcccaggatcgaggagatcacagacaccatgatcttc
agccccagcgacctggtcacaatgacttgccgagatgtggatctcaactacgccatcaga
gatgctttcacagatacagcaatcagctcatcgcgggtgaacggggaacaccgggagaag
gtgctgcagcggtgggacggaggcgacagcaacggagaaggcttcgacctggagacggac
acgtctaatggctgggatgccagcgaaatgttcaagtttaacgaggagacgtatggcgtc
acgtccacctatgattccagcctctccatgtacactgttcccctggaaaggggcagctcg
gatggcttccggcagcgggaggcacgtgcggctcgcctagcgaatgagatcgagggaagc
ccccagtaccgtcaccgcaccaacctggagaacgatgataagagcgaggaggacaagtac
agcgccgtggtccgagagagagatgaggggagggagaggggcagccctggattccagagt
agtgccgggagcagggagggtaaatacattcctcttccccagagggccagggagatgggt
gtgtcccccagcagcctgaggggcggagcctctggtccaatacccaatcgaacaggagtc
cccggctcctctaggccctcccagggttctgataggagcagcccgctgtccgtcaggggc
gcctattctccccaccagtcccaagccagccccccggcccagcccagtagccctaccccc
tcctcttcctcctctcacccgatccctcactccatctctcacccacaagctctagccgat
gcttcacgctcttctgtcaacggagtgtcatccagaacttctcccaaagcccagagagct
gtacagaccaatagaactctgcgcaacccaagttcccagtcctcacctgcagtctctcgc
tctccaaaactagacgaccccgttctggctggccctgcctacctggacacttcctcctcc
tcgatcgcctcggcaacacccaagtcctctggccccacccctctgttcactgtggatgtg
aatgagatcctgagctcagcggctaaggagaggacagaaggcccagtcagccctcaggac
ggcaagagcggcaaagttccctcagtcctgcagagaacacagttggaggagctccggaaa
tttggtaaagagttcaggctccagcccagctcctccccttctgctggccccacttcctca
gatcccgcccagccctccccatcagactccgccaccacagccgagtctatacccgcccca
ggccacaccccctcccaggacccccagactggagaggggtcctccttcaccccgaacccc
actacccctaccccctctccagcccccaacaccacctctcagtcatcaggtcaagacaga
caggctgcggggacaccccagccagccaggacccctggcagcgaggagggcggcgagcga
gtggagggcgtggctgaccaggtgaagaagtcgacgctgaaccccaacgccaaagagttc
gtcttcaaggcacccatgaccctggtgaagccgtccccagcccccacccccccacggccc
actcctctcagcccctccgtggtgctccagccccccccgggacaacaggccatctacagc
accccctacctgtcctacctctcccccgtacagatacagggacactctgtacagcctccc
cagatgtatcagtacaccatgtccacagtccagcaggggaagtatcccagagctaaaggc
caggtggtaggccctcgtccggaccaccacggctcttctcagccccagatgctccaggct
gcagcgtctgcagcaggccctcccctggtggcctccccctacccccaggcctacctgcag
tacagtcaggtcatccagggcatgccccactaccccggacagccgatgtactccatgctg
cagggtggggccaggatgttgactcaggcgggccacccccaggctctgggccccccaggc
cctcagtaccccggacagacagaggggcccccgggaccacaaccggccatgtatgctccc
cagcagttctcccaccattctagctccatgcaccctccgcagccctccagcacacctact
gggagccagccccctccccagcacactgcccccagccctgggcacggacagtcgggccag
ggaggcccccagccccagtccatgtaccacgctgggcccctgccagcacccacacctcct
aacatgccccctggccacagctctccccaggcctcttaccccatgcagggctacagcctg
cccacccaccagcccatggcccaacactaccccggcctgggacagctcacacaggcccat
gttgcccaaggtatgtctggcccccaccaccaaggaggccacggcccgccccagatgatg
ctgcactacgccccgccgccacagcaaggcccaggctctgcccagcagcacggccctccc
ccccagcagggggcgcaccaacactactacatccaacacccacaggctgtacaggtgcag
gctcaccccacccagcagctctccttccacccccctggaaactga

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