Salvelinus namaycush (lake trout): 120032910
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Entry
120032910 CDS
T07522
Name
(RefSeq) (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O-like
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120032910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120032910
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
120032910
Ubiquitin system [BR:
snh04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
120032910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-A_UBE2O
SH3-B_UBE2O
SH3-C_UBE2O
UQ_con
Motif
Other DBs
NCBI-GeneID:
120032910
NCBI-ProteinID:
XP_038835096
UniProt:
A0A8U0U120
LinkDB
All DBs
Position
Sna39:complement(15994066..16038850)
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AA seq
1343 aa
AA seq
DB search
MAEPVASDAIATDAALSPAVSPGSEPPSMALSPSAGGSQRLLFSHDLVSGRYRDLVRFGL
VRMIQGEEEFDSDSDLEDGGGRGGGGGGGCIPCNSDTESSVVDSLAPLGRGFVRVQWYPE
GGKQDIRETKLKLIDRSIVIRDIVRRMNSNDNQCGIVTNIDIECAVKLVGTNCVLYPVNS
KDLHHIWSFMYGDYIAYDFWLGKVYDLTNHIILKLSNGARCSMNVEDGAKLYDVCPHVSD
SGLFFDETYGFYPGQVLIGPAKVFSNVQWLSGVKPVLRKKSKFRVVVEEVQVAELKVTWI
TKSYSPKGTDSVYPPPSTISQENLCRVKRLGYYDHTQRQLGERALYVFPAKGDITCEWPD
GAPGLPEDPVARKLKRMFKKESLVKKTNENAETQGANQHSADKTDSLYGDLKPDNTHPDP
TDHTALPRPHHPNNGPNHALQPLTLCAPPSDPWPEPTEQDADDEAGAEDTDDTLSLTSSA
SSTASSQSGGLGGLNRKKSIPLSIRNLKRKHKKKRTKFSREFKPGDRVAVEVVSTKTSAD
VLWKDGRMETLIRSNDLIPIQHLDNHEFCPGDFVVDKRPQAPTDPGVYGVIQSGDHKGRT
CAVKWIKLNASSDDVEVTGEEEDVSVYDIADHPDFHFRTTDIVIRIGNSENGRNTECEND
TSVGQVFRVDVSSKVEVVWADNSMTIVLPQHLYNVESEIEETDYDSVEESSSGLSTEEWE
DESDSWETDNGLTTNEDDQHPANDDTATPAPTPTGSSPFIIPPEEGGKAGATTPTKPPNS
SEDLEGAGAIVSPGTGAGGTTPGAGGGDAAEKLPGKEGTPRGFRELKEALKILESLKNMT
VEQLWTGVSPTSPTSGAAPAANGTNANAATAITPEKPTKEKRFLDDIKKLQENLRKTLDN
VAIVEEERMEAVVEERPQEEAAAAKTPGTAPEWPSDTPVLCQQSGGKPGVTFTSAKGEVF
SVLEWSPDTHTFKKMEFQPAEAKKFFSTVRKEMALLATSLPDGIMVKTFEDRMDLFSALI
KGPTRTPYEDGLFLFDIQLPNIYPSVPPLFRYLSQCSGRLNPNLYDNGKVCVSLLGTWIG
KGTERWTSKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIKMV
QSMTQLLQTPIEVFQQEIRQHFTSSGWRLVHRLEAWLELHELAERGPPPRPSRDRPPSVG
PLDETLPLDLLAHSTPNKPQGTGDEELEDSGLSLSTTAASQQELSQNLDGAVLASEVAGV
SVVVSGSVRAATSDSAGGSQPAVRPKKRRKSYRSFLPERSGYPDIGFPLFPLSKGFVKSV
RSVLLQYRAALAAATIPDHIEDK
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccggtggcatcggacgcaatagcaacagacgcagctctttctccggctgta
agcccgggctcggagcctccatccatggcgctctctccttctgcaggcggctcccagcgg
cttcttttctcccatgatttggtgtcaggtcggtatcgcgacttggtccggttcggccta
gtcagaatgatacaaggcgaggaggagtttgattcagactcggacctcgaagatggcgga
ggtagaggcggcggtggtggtggtggctgtatcccctgtaactcggacaccgagagcagt
gttgtggacagcctggcacctctgggaaggggttttgtccgggtgcagtggtacccagaa
ggagggaaacaagacatacgggaaacaaagctgaaacttatagatcgatccatcgttatc
cgagacattgtgcggcggatgaattctaacgacaaccagtgtggcatcgtgaccaacatc
gacatagagtgtgctgtaaaactagtggggaccaactgtgtcctttaccctgtcaacagt
aaagacctacatcacatctggtctttcatgtatggggactacatagcctacgacttctgg
ctggggaaggtgtacgacctgaccaaccacataatcctcaagctttccaatggcgccagg
tgttccatgaatgtggaggacggcgccaagctgtacgacgtctgtccacacgtcagcgac
tcgggtctgttcttcgacgagacctatggtttctacccaggccaggtgctgatcgggccg
gccaaagtcttctccaatgtccagtggctctccggggtcaagcccgtactccgcaagaag
agcaagttcagggtggtggtcgaagaggtccaggtggcggagctgaaggtgacgtggatc
accaagagttactcccccaagggcacggacagcgtctacccacctccgtccaccatctca
caggagaacctctgcagagtgaagcgtctgggctactacgaccacacccagaggcagctg
ggggagagggctctgtacgtgttcccagccaagggagacatcacctgtgagtggcccgac
ggagcccccggactcccggaggaccccgtagccaggaagttgaaaagaatgttcaagaag
gagtcgttagtgaagaagaccaatgagaatgcagagacacaaggtgcaaaccagcactcc
gccgacaagacggacagtctttacggtgacctcaagccagacaacacccacccagacccc
actgaccacaccgccctcccccgccctcaccaccccaacaacggccccaaccacgccctc
cagcccttgaccctgtgcgctcctccctctgacccatggcccgagcccacggagcaggac
gcagacgacgaggctggggcggaggacacggacgacaccttgtcgctgacgtcatcggcg
agcagcacggcgtcgtcgcagagcggcggtctggggggcctgaacaggaagaagagcatc
cctctgtccatccgcaacctgaagaggaagcacaagaagaagaggaccaagttctcccgc
gagttcaagcccggcgacagggtggcggtagaggtggtgtccaccaagacctcggccgac
gtcctctggaaggacggccgtatggagaccctcatccgctccaatgacctcatccccatc
cagcacctggacaaccacgagttctgccccggagactttgttgtcgacaaacgaccccaa
gcccctacggacccgggcgtgtacggggtcatccagtcgggcgaccacaaaggcaggacg
tgtgctgtgaagtggatcaaactcaacgcctccagcgacgacgtggaggtcacaggagaa
gaggaggatgttagtgtgtacgacatcgccgaccacccagacttccacttccgtaccact
gatatcgtcatcaggatagggaactctgagaacgggcggaatacggagtgcgagaacgat
acgtcagtaggtcaggtcttcagagtggacgtgagcagcaaggtggaggtggtgtgggcc
gacaactccatgaccatcgtcctaccacagcacctgtacaacgtggagtctgagatcgag
gagactgactatgactctgtagaggagagcagcagtggcctgtccacggaggagtgggag
gacgagagcgacagctgggagactgacaacggcctgaccaccaacgaggacgaccagcac
cccgccaacgacgacaccgccaccccggcccccacccccaccggctccagccccttcatc
atcccgccagaggagggcggcaaagcaggggccaccacccccaccaagccacctaactct
tcagaggacctggagggagctggggctatagtcagcccaggcaccggtgctgggggaacc
actcctggagcaggagggggtgatgccgcagagaagcttcccgggaaagagggcacaccg
cggggcttccgtgagctcaaggaggccctgaagatcctggagagcctgaagaacatgacg
gtagagcagctatggaccggcgtctcgcctacctcgcccacgtccggtgccgcgcccgcc
gccaacgggactaacgccaacgccgccactgccatcacgccagagaagcccaccaaggag
aagcgcttcctggatgacatcaagaagctccaggagaacctgaggaagaccctagacaat
gtggccatcgtggaggaggagcggatggaggcggtggtggaggaaaggccccaggaggag
gcggcagcggcgaagacgccaggcacggcgccagagtggccaagcgatacgcctgttctg
tgccaacagagtggtggcaagcccggagtcaccttcaccagtgccaagggagaggtgttc
tctgtgctggagtggtcaccagacacccacacctttaagaagatggagttccagccggcc
gaggccaagaagtttttcagcactgtgaggaaggagatggctctgctggccacctcgctg
cccgacggcatcatggtcaaaaccttcgaggaccgcatggacctgttctcggccctgatc
aaggggcccacgcgcaccccttacgaggacggcctgttccttttcgacatccagctgcca
aacatttacccgtcggtgccgcccctcttccgctacctgtcacagtgcagcgggcgcctc
aaccccaacctctacgacaacggcaaggtctgcgtcagcctgctgggcacctggattggc
aagggtacagagaggtggaccagcaagtctagcctgctgcaagtgctcatctccatccaa
ggcctgatcctggtcaacgagccctactacaatgaggcaggtttcgacagtgaccggggc
ctgcaggagggctatgagaacagtcgctgctacaacgagatggccctcatcaagatggtg
cagtccatgacccagctgctgcagactcccatagaggtgttccagcaggagatccggcag
cacttcacctctagcggctggcgcctggtgcaccgcctggaggcctggctggagctccac
gagctagccgagaggggccctccgccaagaccatcccgggacaggcctccctcagtgggg
cctctagacgagacactccccttggatcttctggcccacagtacccctaacaagccccag
ggcaccggggatgaagagctggaggactctggcctgagcctttccaccaccgccgcttcc
cagcaggagctcagccagaacttggacggcgccgtcttggccagtgaggtggccggggtg
agcgtggtggtctccgggtctgttagggcagccacctcagactctgcgggcggcagccag
ccggcggtgcgaccaaagaagcgcaggaagagctaccggagcttcctccccgagcggagc
gggtacccggacattggcttccccctctttcctctctccaagggctttgtgaagagcgtg
cgcagcgtgctgctgcagtaccgggccgccctggccgccgccaccatcccagaccacata
gaggacaagtga
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