Salvelinus namaycush (lake trout): 120032973
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Entry
120032973 CDS
T07522
Name
(RefSeq) integrin alpha-X-like
KO
K05718
integrin alpha L
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
snh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120032973
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120032973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120032973
04515 Cell adhesion molecules [BR:
snh04515
]
120032973
04090 CD molecules [BR:
snh04090
]
120032973
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120032973
Cell adhesion molecules [BR:
snh04515
]
Integrins
Integrin alpha subunits
120032973
CD molecules [BR:
snh04090
]
Proteins
120032973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
ITGAX-like_Ig_3
Integrin_A_Ig_2
VWA_2
FG-GAP_3
FG-GAP_2
Copine
Mid2
ACT_ACR9_3rd
Motif
Other DBs
NCBI-GeneID:
120032973
NCBI-ProteinID:
XP_038835176
UniProt:
A0A8U0Q2Y9
LinkDB
All DBs
Position
Sna39:complement(14901679..14933340)
Genome browser
AA seq
1025 aa
AA seq
DB search
MAGQSTSPPTFTACSPGLAHECDGNSYLNSICYQFNSQLQITSNFTPDFQECTKKIVDLV
FLFDGSGSMTTTEFDKNKGFINNIMTTLKNSSIKFAAVQFSSNTRTVFNFKDYQEGRAFT
KLWEEKQMADLTNTHQAIDFVLKNIFENQTAGATAYATKVLVVITDGDPSDTDRRFKSIK
RSDEKNIIRFIIGVKILDLTKLKSLASEPKENNTFLIQDYNGLKGILDNFQKKIFNIEGS
KTALAGNLTKEMSQSGFSAVYVDKDTLVLGSVGSNNWRGSLLETKGLRSEEREIQDLTLD
KDSYMGYSVAVGKKNENLLYFTGAPRSEHMGQILLFNKVNNNWTVAQRLFGEQMGSYFGA
ELCSVDIDSDGNLDFLLVGAPMFHQPPREGRIYVYTLTDKLELRMEMNVSVLSQGRFGSS
ICSLTDLNGDGLKDVAVGAPLEDDNRGAVYIYLGEKLKGIRPEFSQRISAVMMRSKIQFF
GQTIDGKMDLGEDGLTDIVVGARGAVVVLRSRPVLSVSAHLHFHPSGISTDNFDCLAKEI
ISPVVTLTACFNMAEATKSKAGALSAGMNVSYSLDVDPLRQRSRAFYSDTNKGARRLLST
VELRKERTCFNHSLYMTQCVIDTLSPIIIQLNFSQSESQQESLTAILNTDSPTQAVVEVP
FEKNCKENETCLAELEVDFNFITSTLLVVDQSYFNVTIRLSNHGDDSYNTSLTLLYPPGL
SFSMMHLLKSTRRTVFSCGGLEGEMNRTTCSVSIPVYRSKTTAVFTSKFHILNTYDWNDT
MEMTVIGLSDNGNSTNSSLTRTIPVQFAVDLVAKALLQDSTTYINFTLEDTSPKRLVNVY
EVQNLGFKSVPVTVTFTFPTKLEHRFEMKDYQISVLQNHTQCGKIINSTTEYCSPEKYCK
SIECESFLLEKFLTVTFVLSGNVSFKDLDQHARSLSLPKKFTGDRETVNFISFVKLSYDK
KRYVQTASDPRIDVQAELIIPPHRDLIIGTGVGVGLFLLIIITMAMYMMGCFQRKSLDNE
ENEGE
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggctggacaatctacttctccgccaacgttcactgcctgcagccctggcctggcacac
gagtgcgatgggaactcctatctgaacagtatctgttatcagttcaacagccagctccag
atcacctcgaacttcacacctgacttccaagaatgtactaagaaaatagtggacctcgtt
ttcctctttgacggatcaggaagcatgacaacgacagaatttgataagaacaaaggtttc
ataaacaatatcatgacaaccctaaaaaactcctcaatcaagttcgcagcggttcagttc
tcatcaaacaccaggacagttttcaacttcaaagactaccaagaggggagagcctttact
aaactttgggaagaaaagcaaatggctgatctaaccaacacacatcaggcaatagacttt
gtcttgaaaaacatttttgaaaaccaaaccgccggcgccaccgcatatgcaactaaagta
ctggtcgtaataacagatggagatcccagtgatactgatagaaggttcaagtctatcaaa
agaagtgatgagaaaaacatcatccgcttcatcatcggggtcaagattcttgatttgacg
aaactcaagtccctggcatcagagccaaaagagaacaacactttcctaatccaggactac
aacggactaaaaggaatcctagacaactttcaaaaaaagatcttcaacattgaaggttcc
aagactgctctggctggaaacttgactaaggagatgtctcagagtgggttcagtgctgtc
tacgttgataaggacaccttggttttgggctcagtgggatcaaacaactggcgtgggtcc
ctcttagagactaagggtctgagatcagaggaaagggaaatccaggacctcacattggac
aaagattcctatatgggatactctgtagctgttgggaagaagaatgagaaccttctatat
tttactggagcaccaagatctgaacacatgggacagatcctactttttaacaaggtcaac
aacaactggactgtggcacaaagattgtttggggaacagatgggctcctacttcggggca
gagctgtgttctgtggacatagactcagacggcaacttagatttcctcctggtgggggca
ccaatgtttcaccaaccaccgagagagggcaggatctacgtctacacactgactgataag
ctggaactgaggatggagatgaatgtttcagtgctgtctcagggtagattcggctcctcc
atctgctctctcacagacctgaatggagatgggctgaaggatgtagctgtgggcgctcca
cttgaggacgataacaggggggccgtgtacatctacctgggtgaaaagctaaaggggatc
cgccctgaattcagccagcgcatctcagctgtgatgatgagatctaagatccagttcttt
ggccagacgattgatgggaagatggacctgggtgaggatggactgactgacatcgtagta
ggagcgcgtggcgcagttgtcgtcttgaggtccagaccggtcctcagcgtctctgctcat
ctccacttccatccctcggggatcagcactgataactttgactgtctggcaaaagagata
atttcccccgtggtcactttaacagcctgctttaacatggcagaggcaacaaagagtaaa
gctggggcactgagtgcagggatgaacgtctcctactcgctggatgtggatccactgaga
cagaggagccgagcattttacagcgacacgaacaaaggggccagaagacttctctctact
gtggagctgagaaaggagcggacctgcttcaaccactcactctacatgacacaatgcgtg
atcgacacattatcgcccataatcatccaacttaatttttctcaatctgaaagccaacaa
gagagtcttactgccattctgaatactgacagtcctacacaggctgtggtcgaggtgccc
tttgaaaagaactgcaaagaaaatgaaacctgtttggcagagcttgaggtggacttcaac
tttatcacatcaactttattagtggtggaccagagttacttcaacgtgactataagactg
tccaatcacggggatgactcctacaacaccagtctaaccctcctctaccctcctggcctc
tcattctccatgatgcatcttctgaagtccacaaggagaacggtgttcagctgtggtggt
ctggaaggtgaaatgaatagaactacatgcagtgtcagcatacctgtctaccgtagtaaa
actacagccgtgttcaccagtaaattccatattttgaatacatatgactggaacgacaca
atggaaatgaccgtcattggcctgagcgacaatggaaactcaaccaatagttcccttacc
aggaccatccctgttcaatttgcagttgacctggtagcaaaagcccttctccaagactcc
accacttacattaactttactctggaggacacatcacctaaaagactggtgaatgtatac
gaggtccagaacttgggatttaagtctgtacccgtcacagtcaccttcactttcccaact
aagcttgagcacagatttgaaatgaaggactaccaaatatctgtcttacagaaccatact
caatgtggaaagattatcaattcaacaacagagtactgctctccagaaaaatactgcaag
tccatcgagtgtgaaagtttccttttggagaagtttttgacagttacatttgtgctgtct
ggaaatgtttccttcaaggacctcgatcaacatgcaaggagcttgtcattgccaaagaaa
ttcaccggggatagagaaacagtcaatttcatcagttttgtcaagctcagctatgacaaa
aaacgatatgtccagacagcgagtgacccaaggattgatgttcaggctgagctcatcatt
cctccccatagagacctgataataggtacaggagttggagtaggactctttctcctgatc
atcatcacaatggccatgtatatgatgggatgcttccagagaaaaagccttgataatgaa
gagaatgaaggggaatag
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integrated database retrieval system
