Salvelinus namaycush (lake trout): 120032979
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Entry
120032979 CDS
T07522
Name
(RefSeq) rab11 family-interacting protein 4A-like isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120032979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120032979
Membrane trafficking [BR:
snh04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120032979
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
bZIP_2
Shugoshin_N
Motif
Other DBs
NCBI-GeneID:
120032979
NCBI-ProteinID:
XP_038835182
UniProt:
A0A8U0Q205
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Position
Sna39:complement(13379295..13411116)
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AA seq
559 aa
AA seq
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MFFSLFVFRTQVRLAGANGDPNKSNLSLAPQRGDKALAHPVIMCTRVSLNPEPGCHLFPE
GEEEGEVEGRERAELDMDSAVESNPGSDVSEEGRSRVDKEDGPGGLFFPGDKCSQLNPSV
TSDLSTRSSASLNEEQFEDYGEGEDVDYTPSSPCPEDETRTNGYSDLGSSVPSSAGQTPR
KARHLYNNEMMDVYCSQCCKKVNLLNDLEARLKNLKANSPSRKISSTAFGRQLLHTSNFS
SSNGSTEDLFRDSIDSCDIDITEKVSYLEKKVAELENDTLMNGDLKSKLKQENTQLVHRV
HELEEQLKDQEARAEQNTEEEQRRHREAYSKMERDKNTELELLHNRVQQLEEENGDISVN
MCRLKSQTEKLDEEKQSMTYKLEDTSLRLKDEMDLYRKMMDKLRQNRHEFQKEREAMQEL
IEDLRRELEHLQLFKLETEKPGRGRSSSSGLTEFNAKTREMELEHEVKRLKQENLKLREQ
NDDLNGQILSLSLYEAKNLFATQTKAQSLAAEIDNASRDDLMEALKEQEEINFRLRQYMD
KIILSILDHNPSILEIKTN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtttttttcgttatttgtttttcggacccaggtaagactagctggcgctaatggggat
cctaataaatcaaatctctctctcgctccacagcgtggtgacaaagcccttgcacatccg
gtcatcatgtgcacgcgggtgtcccttaacccagagcctgggtgccatctattcccagag
ggagaggaggaaggagaggtggagggcagagagagggcagagttagacatggacagtgct
gtggagagcaacccaggatcagatgtctctgaagaggggaggagcagagtagacaaggag
gatggaccagggggacttttctttcctggagacaagtgcagtcagctaaacccatcagtg
acctctgacctgtcgacgcgttcctctgcctctctgaacgaggagcagtttgaggactac
ggagagggagaggacgtggactacactcccagcagcccctgccccgaggacgagacgcgc
accaacggctactctgacctgggctcctctgtaccctccagtgctggccagacccccaga
aaggcacgccacctgtacaacaatgagatgatggacgtgtactgttcccagtgctgtaag
aaggtcaacctactcaacgacctggaggccaggctgaagaacctcaaagccaacagcccc
agtaggaaaatctccagcacagcctttggcaggcagctcctccacaccagtaacttcagc
agcagcaacggcagcacggaggacctgttccgagacagcatcgactcctgtgacatcgac
atcactgagaaggtgagttacctagagaagaaggtagcagagttggagaatgacacgctg
atgaacggagatctcaagtccaagctgaagcaggagaacacacagctggttcacagggtc
cacgagttggaggagcagttgaaggaccaggaggcgcgggcggagcagaacacagaggag
gagcagagacgacaccgtgaggcctatagcaagatggagagagacaagaacactgagcta
gagctgctacacaaccgagtccaacagctagaggaggagaacggggatatatcggtgaac
atgtgcagactgaagtctcagacagagaaactggacgaggagaagcagagtatgacatac
aagctggaggacaccagtctgaggctgaaggatgagatggacctctacaggaagatgatg
gacaagctgaggcagaacagacacgagttccagaaggagagggaggccatgcaggagttg
attgaggaccttcgtcgggagctggagcacctgcagctgttcaagctggagacagagaag
cctggccgcggccgcagctcctcctctgggctgacggagttcaacgccaagaccagagag
atggagctggagcacgaggtcaagagactcaaacaggagaacctgaaactgagggaacag
aacgacgacctgaatggtcagatcctcagtctgagtctgtatgaggctaagaacctgttt
gccacccagaccaaggcccagtcgctggctgccgagatagacaacgcctcacgagacgac
ttgatggaggccctcaaggagcaggaggagatcaacttccgtttgcggcagtacatggac
aagattattttgtctatcctggaccacaacccctccatcttggagatcaagaccaactag
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