Salvelinus namaycush (lake trout): 120032986
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Entry
120032986 CDS
T07522
Name
(RefSeq) homeobox protein OTX1 B-like isoform X1
KO
K09326
homeobox protein OTX1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120032986
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120032986
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
120032986
NCBI-ProteinID:
XP_038835194
UniProt:
A0A8U0TZU8
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All DBs
Position
39:17897438..17899927
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AA seq
346 aa
AA seq
DB search
MMSYLKQAPYGMNGMGLSGTAMDLLHPSVGYPAHPRKQRRERTTFTRTQLDILESLFGKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQAQSGNNAKVRPAKKKSSPTRESTG
SESSGQFTPPAVTSTGSSSSSSASSGGSHPSGHGGQGLSSTSTSVTAPVSSIWSPAPISP
APAPPPVPDPTPPTSASCMQRSVSGTGGTSSYPVSYSQTAAAYGQGYPAPASTGSYFGGV
ECSSYLAPMHSHHHPHHPHQLSPMTGSSMSGHPHHHIGQTSGHHHHHHPHHHQAYSGAGL
AFNSSDCLDYKEQTAAAAASSWKLNFNTTDCLDYKDQASSWRFQVL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacaggccccgtacggcatgaacggaatggggctcagcggtacg
gccatggacctactgcacccatcagtggggtatccagcgcatccgaggaaacagcggaga
gagaggacaacttttactcgtactcagctggacattctggagtcacttttcggcaagacg
cgctacccagacattttcatgcgggaagaagtcgcactgaaaatcaatttgcctgagtct
agagtccaggtatggttcaagaacaggagagccaagtgccgtcagcaggcccagagtgga
aacaatgctaaagtccggcctgccaagaagaagtcctctccaaccagggagagcacaggc
tcagagagcagtggtcagttcacccctccggcagtgaccagcaccggctcctcttcctct
tcctctgcctcgtccggtggctctcatccctccggccatggaggccaaggcctgagcagc
acttctacctccgtcacagccccagtgtcctccatctggagccctgcgcccatctccccg
gcccccgcaccaccccctgtccccgaccccactccccccaccagtgcctcctgcatgcag
aggtctgtgtcaggtactggaggcacgtcctcctacccagtgtcctacagccagacagcg
gcggcctatgggcagggctaccccgccccggcgtcaacgggctcctacttcggaggggtg
gaatgcagctcgtacctggcccccatgcactctcaccaccacccccaccatccgcaccag
ctcagccccatgacgggctcctccatgtctggccatccacaccaccacatagggcagacc
tcagggcaccaccaccatcaccacccccaccaccaccaggcctacagcggggccgggctg
gccttcaactcctcagactgtctggattacaaagaacaaacggccgcggccgcagcctct
tcctggaagctcaacttcaacaccaccgactgcttggactacaaagaccaggcctcctcc
tggcggttccaagtcttgtga
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