Salvelinus namaycush (lake trout): 120033056
Help
Entry
120033056 CDS
T07522
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
snh00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
snh01100
Metabolic pathways
Module
snh_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120033056
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
120033056
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120033056
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
120033056
Glycosyltransferases [BR:
snh01003
]
O-Glycan biosynthesis
Glycosaminoglycan
120033056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
120033056
NCBI-ProteinID:
XP_038835271
UniProt:
A0A8U0Q026
LinkDB
All DBs
Position
Sna39:complement(8548718..8674942)
Genome browser
AA seq
938 aa
AA seq
DB search
MVGGSCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEERENGGGGASNMREKRDR
VGGGGYKGSSEYMKREVQLQHHPPQGKGTVRHIQQPDGYYSHRPKEKVRVDSNNENSVPK
DFENIDNSNFGARSQPQRQPPGGANSNKHRERLQEKAHAEQATWKDNAPILSRSSNEVLQ
YGRASQGQAQTYPQSQSHPPTQHRHQHQHQTKKQATAAPLEVVYDQPPKCEISGKEAISA
LSRAKTKECRQQIAEVYCRHKEGQLMPEKVTRYCPIEGKANANVVWEEDSSEGPPSAPVR
IAFVLVVHGRASRQFQRLFKAIYHTSHYYYIHIDQRSNYLHRQVQALASQYPNVRVTPWR
MATIWGGASLLTMYLRSMADLITMTDWSWDFFINLSAADYPIRTNSQLVAFLSKYRDMNF
IKSHGRDNARFIRKQGLDRLFFECDTHMWRLGDRKIPEGISVDGGSDWFLLNRPFVEYVI
NSQDDLVTNMKRFYTYTLLPAESFFHTVLENSAHCESMVDNNLRITNWNRKLGCKCQYKH
IVDWCGCSPNDFKPADFHRFQQTARPTFFARKFEASVNQEIVNQLDGYLFGPMPRGTPGL
QAYWESAFDEVDGVATLSDTQLTLYHAFARMGLARAAASLQGDPKDDSCRYFPMGHPVSV
HLYFQSDQFQGYLVKHHATNLATSKLETLETWVMPRKTYKVASPPSTFTRLQFAEIGTEW
DAKERMFRNFGGLMGPMDETVGMQRWSKGPNVTVTVVWIDPTNVIAATYDILIDASAEYT
HYRPPLNQPLRPGVWTIRVLHHWSPVAETRFLISPLAYMKHQPIRQEDTLKLHNGPAKNS
YMEQSFHGLNPVLNIPVHPGQVEQAKRNAGLTGPALEHWVDGLVGAMWEAGDVCSTSMTG
GPGTSCPVMQTCAKTPWSSLSPDPKSQLVPPHADGRIR
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggctcgtgcgctcgcaggttggcccgccgctcgcgttccgccttgatagcg
gctctcaccgtgctgctggtccagacgctgatagtgtggaacttcagtagcctcgattcc
ggggaagaacgggaaaacggcggcggtggcgcgtcgaacatgagggagaagagagaccgg
gtcggcggcggtggctacaaaggcagcagcgagtatatgaagcgcgaggttcagctacag
caccatcctccacaagggaaaggaacggttcgtcacatacagcagccggatggctactat
tcccaccgccccaaggagaaagtcagagtggacagcaacaatgagaactctgtgcccaaa
gactttgagaacatagacaatagtaactttggcgcccgttcgcagccccagcgccagccc
ccagggggcgctaacagtaacaaacacagggagaggctgcaggagaaggcccatgccgaa
caggcaacctggaaggataacgctccgattctgagccggagctccaacgaggttctccag
tacggacgagccagccagggtcaggctcagacttacccccagtcgcagtcccaccccccg
actcaacatagacaccaacaccagcatcaaaccaagaagcaggcgactgcggctccattg
gaggtcgtttacgaccagccgcccaagtgtgagatcagtgggaaggaagccatttcggct
ctgtccagagccaagaccaaggagtgccggcagcagatagctgaagtgtactgcagacac
aaggaaggtcaactgatgcctgagaaggtcacccgctactgtcccatagagggtaaggcc
aatgccaacgtggtgtgggaggaggactcgtcagagggcccaccgtcggcccccgtcagg
atagccttcgtcctggtggtccacggcagagcctcacgacagttccagagacttttcaag
gccatctaccacacctcacactactactatatacatatagaccagcgctccaactacctt
cacagacaggtgcaggccctggcctcccagtaccccaacgtgagggtgacaccctggagg
atggctaccatctggggcggtgccagcctgctcaccatgtacctccgcagcatggcagac
ctcatcaccatgaccgactggagctgggacttcttcatcaacctcagcgctgcagactac
cccatcagaaccaacagccagctggtcgccttcctgtccaagtacagagacatgaacttc
atcaagtcccacggcagagacaacgccaggtttatccgcaaacaaggtctggaccggctt
ttctttgagtgcgacacccacatgtggcgacttggcgaccgcaaaatcccagaaggcatt
tctgtggacggcggttctgattggttcctgctcaatcgtccgttcgtggagtacgttata
aactcccaagatgacctggtcaccaacatgaagcgcttctatacctacacactgctgccc
gccgagtcgttcttccacacggtgctggagaacagtgctcactgtgagagcatggtggac
aacaacctgcgtatcaccaactggaacaggaagctgggatgtaagtgtcagtacaaacac
atagtggactggtgcggctgctcccccaacgacttcaaacctgccgacttccaccgcttc
cagcaaacggcccgtcctacgttcttcgccaggaagtttgaagccagtgttaaccaggag
atagtgaaccaactagatggctacctgtttggacctatgccccgggggacccctggcctc
caggcctactgggagagtgcgtttgacgaggtggacggggtcgcgaccctgagcgacaca
cagctcacactctaccatgcgtttgctcgtatgggcctggccagggcggcagcatcgctg
caaggagatcctaaggatgacagctgcaggtatttccccatgggccacccggtgtcagtg
catctctacttccagtcagaccagttccaaggctacctggtcaagcaccatgccactaac
ctggcaaccagcaagctggagaccctggagacctgggtgatgcccaggaagacctacaag
gtggcttccccacccagcaccttcaccaggctgcagttcgctgagatcggcacggagtgg
gatgccaaagagcgcatgttccgtaacttcggtggtctgatgggtcccatggacgagacc
gtcgggatgcagcggtggtccaagggccccaacgtgaccgtcaccgtggtgtggatcgac
cccaccaacgtcatcgctgccacctacgatatcctgatcgacgccagcgcagagtacacc
cactaccgaccccccctgaaccagcctctcaggcctggggtgtggaccatacgggtgttg
catcactggagccccgtggccgagaccaggtttctgattagtccgctggcttatatgaag
catcagcctataagacaagaggacacgctgaagctccacaacggaccagccaagaacagt
tatatggagcagagcttccatggcctcaaccccgtgctcaacatccctgtacacccgggc
caggtggagcaggctaagcgcaacgccggcctgactggccccgccttggagcactgggta
gacggcctggtgggtgcgatgtgggaggctggggacgtgtgttccacctccatgacaggg
ggacctggaacatcctgccccgtcatgcagacctgcgccaagaccccctggagctcgctc
agccccgaccccaagtcccagctggtcccgccgcacgccgacgggcgcatcaggtag
DBGET
integrated database retrieval system
