Salvelinus namaycush (lake trout): 120033161
Help
Entry
120033161 CDS
T07522
Name
(RefSeq) tissue-type plasminogen activator-like isoform X1
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120033161
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120033161
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120033161
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
120033161
Peptidases and inhibitors [BR:
snh01002
]
Serine peptidases
Family S1: chymotrypsin family
120033161
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
120033161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
EGF
DUF1986
hEGF
cEGF
JAG1-like_EGF2
EGF_C8A_B_C6
Trypsin_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
120033161
NCBI-ProteinID:
XP_038835405
UniProt:
A0A8U0Q1T6
LinkDB
All DBs
Position
Sna1:30970294..30990030
Genome browser
AA seq
581 aa
AA seq
DB search
MARILGLLLFLSALCCSLADKIELRRAKRGTRYYRARCVDGQSAAVRGYGDTWMRWRGQR
VEYCRCASQGRERCHYVPVITCYQSRCYNGGTCKEAVYSSDYLCQCPPGFTGAQCEINTN
EKCVVGQGKGYRGTWSISRIGSECINWNSTTLRGKKFTAKKPEANSLGLGNHNFCRNPDN
DTKPWCYVYKGNQIVWEFCTLSSCSADQRPVECVQGSGQTYRGTEAVTKRGSSCLPWDSP
LITRKFYNAWRSDARQLGLGSHNFCRNPDGDLGPWCHVYKNMKLTWELCDITKCPRRPTT
ITTLGPRAPTSNNNNRGTCGQRADNNLPSFRILGGAQKSDITEQPWQAAINVYRPRNKAH
LFLCGGVLIDSCWVLSAAHCFDDGFKPQRLQVVLGRTFRKNSSSSEQIFEVEKYWSHEKY
NKTTFDNDIVLMKLKSDIGLCAVNSPEVLPACLPDPGLVLPDWTECEISGYGREKEFDAM
YSERVKRGHVRLWPQDRCVPNVLSGRVVTSNMLCAGDTRGLDDACKGDSGGPLVCPNDGR
MTLMGLISWGDGCGKKDTPGVYTRVTQYTDWISSKKQETSQ
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggccagaatattgggactgctgctcttcctgtcagctctctgctgctccctagcggac
aaaattgagcttcgtcgcgcgaagagagggacacgctactatagagcgcgttgtgtggat
ggccagtcagctgcggtgcgtggttatggggacacatggatgagatggaggggccagcgt
gtggagtactgccgctgtgcatcacaaggacgagagcgctgtcactacgtgcccgtcatc
acctgctatcagtcaaggtgctacaacgggggaacctgtaaggaggcggtctactcctct
gactatctgtgccagtgtccaccaggcttcacaggagcccagtgtgagatcaacaccaat
gagaagtgcgtggtgggccagggtaaagggtaccgtggtacgtggagtatcagtcggatc
ggctcagagtgcatcaactggaactctaccaccctcagagggaagaagttcaccgccaag
aaaccagaggctaacagcctggggctgggcaaccacaacttctgcaggaatccagacaat
gatactaagccatggtgttatgtctacaagggaaaccaaatagtctgggagttctgtact
ctctccagctgctcagcagaccagaggccagtggagtgtgtgcagggctcagggcagacg
tacagggggacggaggccgtcactaagaggggctccagctgtcttccctgggactcaccc
ctcatcacccgcaagttctacaacgcatggaggtctgacgccagacagctggggctgggg
agtcacaacttctgcaggaacccagacggtgatctcggcccctggtgtcacgtctacaag
aacatgaagctgacctgggaactctgcgatattaccaaatgcccgaggagaccaaccacc
attactactctaggccccagggctcccaccagcaacaacaacaacagaggtacctgtggc
cagcgtgctgacaacaatctcccctccttccgtatcctgggaggagcccagaagagtgac
atcacagagcagccgtggcaggcagccataaacgtgtaccggcccagaaacaaagcacac
ttgttcctgtgtggaggggtccttatagactcctgctgggtcctctctgctgcacactgc
ttcgacgacgggtttaaaccacagcggctgcaggtggttctaggcaggacgtttcgtaag
aactcctccagcagtgagcagatctttgaggtggagaagtactggagccacgagaaatac
aacaagacaacctttgacaacgacattgtcttgatgaagttgaagagtgatattggcctg
tgtgctgtgaactcgccggaggtcctacccgcctgtctgcctgacccagggctggtactg
cccgactggaccgagtgtgagatctccggctacggcagggagaaggagtttgatgcgatg
tactctgagcgggtgaagaggggtcacgtgaggttgtggcctcaggaccgctgtgtccct
aatgtcttatctggacgtgtggtcacctccaacatgctatgtgccggggacacccggggt
ctggacgatgcctgcaagggggactctggtggtcctcttgtctgtcccaatgatgggagg
atgactctgatggggctgatcagctggggagatggctgtgggaagaaagacacacccggg
gtgtacacacgtgttacacaatacactgactggatcagcagcaagaaacaggaaactagc
cagtaa
DBGET
integrated database retrieval system
