KEGG   Salvelinus namaycush (lake trout): 120033191
Entry
120033191         CDS       T07522                                 
Name
(RefSeq) putative claudin-24
  KO
K06087  claudin
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03272  Virion - Hepatitis viruses
snh04382  Cornified envelope formation
snh04514  Cell adhesion molecules
snh04530  Tight junction
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    120033191
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120033191
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    120033191
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    120033191
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:snh03037]
    120033191
   04147 Exosome [BR:snh04147]
    120033191
   04515 Cell adhesion molecules [BR:snh04515]
    120033191
Cilium and associated proteins [BR:snh03037]
 Other cilia and associated proteins
  Stereociliary proteins
   120033191
Exosome [BR:snh04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   120033191
  Exosomal proteins of colorectal cancer cells
   120033191
Cell adhesion molecules [BR:snh04515]
 Immunoglobulin superfamily
  L1 family
   120033191
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 SUR7 DUF308 TAF8_C
Other DBs
NCBI-GeneID: 120033191
NCBI-ProteinID: XP_038835400
UniProt: A0A8U0U143
LinkDB
Position
Sna40:7845429..7846112
AA seq 227 aa
MDPGVCVLELLGILFSIGAWICSLATTIMSTWLTLSTDLLPAESYELGLWETCVVQDLGI
LECRPYDSLLGLPPDIKLARILMCVTVATGLLGLLLAIPGIYWINSCNQGPEGLRVKRLM
KMLGGILCLVAGILGLIPVSYIAHLTVMRFFDEAVPAIVPRWEFGDALFCGWTAGFLHLV
AGSLLVTSCVCLQEEPCTLQMPIPLPRRHTYVHTTNTPHRKRSMEYV
NT seq 684 nt   +upstreamnt  +downstreamnt
atggatccgggggtgtgcgttctggaactcctcgggatcctcttctctattggtgcctgg
atctgctcgctggccaccaccatcatgtccacctggctgaccctgtccaccgacctgctg
cccgcggagagctatgagctgggcctgtgggagacgtgtgtggtgcaggaccttggaatt
ctggagtgcagaccgtatgacagtctcctcggcctgcctccggacattaaactagcccgg
atcctcatgtgtgtaacagtggccacaggcctcctgggtctcctgctagccattcctgga
atctactggatcaacagctgcaaccaggggcctgaggggttgagggtgaagagattgatg
aagatgctgggggggatattgtgcttggtcgcagggatactgggtctcatacctgtctct
tacatcgctcacctgacggtcatgcggttcttcgatgaggccgtgccggccatcgtgccg
cgctgggagtttggggatgccctgttctgtggctggacggcggggtttctacacctggtg
gctggctctctgctggtcacctcctgcgtgtgcctacaagaggagccctgcaccttacaa
atgcctataccgctaccgagaagacatacatacgtgcacactaccaataccccacatagg
aagaggtccatggaatatgtttga

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