Salvelinus namaycush (lake trout): 120033208
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Entry
120033208 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120033208
04082 Neuroactive ligand signaling
120033208
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120033208
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120033208
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
120033208
NCBI-ProteinID:
XP_038835420
UniProt:
A0A8U0Q2I5
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Position
Sna40:complement(9472742..9504701)
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AA seq
454 aa
AA seq
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MKHVWISVLLVCITCHVGLGQTTAEALKEAEANDNITIFTRILDGLLDGYDNRLRPGLGE
KVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLPLNNLLASNIWT
PDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLK
FGSYAYPVSEVVYLWQTGAAKSVVVAEDGSRLNQYHLIGQTAGSEDIYTSRGEYTVMMCH
FYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNS
LPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAMEAQHPKKRDPMVL
SKKPNNVCTAGVNYTPNITKDISISTISNSTSIQLRSSETEVLDPKKTYNSVSKIDKMSR
IVFPVLFGTFNLVYWATYLNREPVIKGVNILAPT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgtgtggatctctgtcttgctggtgtgtattacatgtcacgtgggtcttggc
cagaccacagcagaggcattgaaagaggcggaggctaatgacaacatcaccatcttcacg
cggatactggacggactgctggacggctacgacaacagactcagaccaggacttggagaa
aaggtcacggagatcaaaaccaatatatttgtcacaagctttggcccagtttcagatact
gaaatggaatacaccattgatgtgtttttccgacaaagctggaaagatgagcgcctgtgt
ttcaaaggacccatggagatgctgcctcttaacaacctcctggccagtaacatctggacc
ccagacacattcttcctcaacgggaaaaagtctatcgcccacaacatgaccacacccaac
aagctactgagactgaaggatgacgggacgctgctctacactatgaggttaaccatatcg
gcagagtgtcccatgcagttggaggacttcccaatggatgctcatgcttgccctttgaag
tttggaagctatgcctatccagtctctgaggtggtgtacctctggcaaactggtgctgcc
aagtctgtagtggtggcagaagacggatcccgtctcaaccagtaccacctgattggccag
accgcaggctctgaggacatctacaccagtcgaggtgagtacaccgtcatgatgtgtcac
ttctacctgaagaggaagattggttactttgtcattcagacctacatgccctgcttcatg
accgtgatcctgtcccaggtgtccttctggctcaaccgtgaatctgtaccagccaggacc
gtttttggtgtcactacagtgctgactatgactactctcagtatcagcgctcgcaactcg
ctgcctaaggtggcctacgccacagccatggattggttcatcgctgtgtgctatgcgttc
gtcttctccgcgcttatcgagtttgccaccgtcaactatttcaccaagaggagctgggcg
tgggatggcaagaaggccatggaggctcagcacccaaagaaaagggaccctatggtgctt
tctaagaagcccaacaacgtctgtacagcaggagtaaactacacccccaacatcactaag
gatatctctatctccaccatctccaacagcacctccatacaactaagatcgtctgaaacg
gaagtcctggaccccaagaaaacctacaacagcgtgagcaaaatcgacaaaatgtcccgg
atagttttccctgtcctatttggaacctttaacctcgtgtactgggctacttacctcaac
agagaaccggtcatcaaaggagtcaacattttggctccaacatag
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